BAC Information

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BAC

Clone NameB6Ng01-032H18
ChromosomeY (Build37)4 (Build37)
Map Location 1,120,708 - 1,120,95924,891,095 - 24,891,587
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032H18.bB6Ng01-032H18.g
ACCDH861808DH861809
length1,028487
definitionDH861808|Mus musculus domesticus DNA, BAC clone: B6Ng01-032H18, 5' end.DH861809|Mus musculus domesticus DNA, BAC clone: B6Ng01-032H18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(1,120,708 - 1,120,959)(24,891,095 - 24,891,587)
sequence
gaattcccctgtattggggcatataaagtttgcatgtcctatgggcctct
ctttccagggatggccgactaggccatcttttgatatatatgcagctaga
gtcaagagttctggcgttctgattagttcatattgttgttccacctatag
ggttgcagaccccttcagctcttgggtactttctctagctcctacattgg
gggccctgtgttccatccttagatgattgtgagcatccacttctgtattt
gccaggcactggcaaagcctcacagaagacagctatatcagggtcccttc
agcaaaatcttgctgacataaacaatagtgtctgcctttggtggctgatt
atgggatggacccctgggtggggcaatttctggatggtccatccttctct
attagctccaaactttgtctttgcaactccttccacaggtatttcattcc
ctattgtagggaggaatgaagtatccatgcgttgatcatccttcttcttg
attttcttgtgttttggaagttgaatcttgggtattgtaggtttctgggc
taatatccacttatcagtgagtacatatcatatgacttcttttgtgattg
ggttacctcactcaggatgatatcctccggatccatcaatttgcctaaaa
attttcataaactcattgtttttaatagctgagtagcactccattgtgta
aatgtaccacattttctgtatccattcctctgttaagggacatctgggtt
tttccagcttctggctattataaatagggctgttatgaacacagtggagc
atgtgtccttattgcaagttggaacaccttctgggtatatgccctggaga
catattgctggatctagtggtagtactatgtctagttttctgaggaaccg
ccagactgatttccagactggttgtacagcttgcaatcccaccagcatgg
aggactgttcctctttcacatcctcgccagcaactgctgtcactgaattt
ttgatcctagccattctgactgttgatt
atgtatgcatggcaggtgctttactgatagagccatctcccctcatcatt
tgtttttacaccaaattatatgacacatgatgctttgtgatccccccgcc
cccccactggagggtcatctctccgcagctcaatctactttcatggggac
tgtggccatattctccatcactgctcctgtacatttagaagcaggcacac
aactgaagctgagaacagctgtgtggccccagcaagtcagatgttgaaat
ttcatttctttattccttaaatgaaagggaagttttaggttgttctaaag
tctcttctagagttatagatatgatatgtcaggaatcctataacacttac
aagtgaaaagaaaaatatgaaatggtttagatctgtgacaattagaaagt
ttcctatgtgggaagaaacaagcggaagttaacatattttaattttatta
cattctctgtgtgtgtgtatgtgtgtgtgtggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120708_1120959
seq2: B6Ng01-032H18.b_48_297

seq1  ATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCT  50
      ||||||||||| |||||||||||||||||||| |||| ||||||||||||
seq2  ATTCCCCTGTATTGGGGCATATAAAGTTTGCATGTCCTATGGGCCTCTCT  50

seq1  TTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGT  100
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGT  100

seq1  CAAGAGCTCCGGGGTACTGGTTAGCTCATAACGTTGTTCCACCTATAGGG  150
      |||||| || || || ||| |||| |||||  ||||||||||||||||||
seq2  CAAGAGTTCTGGCGTTCTGATTAGTTCATATTGTTGTTCCACCTATAGGG  150

seq1  TTGGAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGG  200
      ||| ||| ||||| |||| ||||| ||||||||||||||||| |||||||
seq2  TTGCAGACCCCTTCAGCT-CTTGGGTACTTTCTCTAGCTCCTACATTGGG  199

seq1  AGCCCTATGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTT  250
       ||||| || ||||||| |||| ||| ||||||||||||||||||| |||
seq2  GGCCCTGTGTTCCATCC-TTAGATGATTGTGAGCATCCACTTCTGTATTT  248

seq1  GC  252
      ||
seq2  GC  250

seq1: chr4_24891095_24891587
seq2: B6Ng01-032H18.g_71_563

seq1  GAATTCATGTATGCATGGCAGGTGCTTTACTGATAGAGCCATCTCCCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTATGCATGGCAGGTGCTTTACTGATAGAGCCATCTCCCCTC  50

seq1  ATCATTTGTTTTTACACCAAATTATATGACACATGATGCTTTGTGATCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTGTTTTTACACCAAATTATATGACACATGATGCTTTGTGATCCC  100

seq1  CCCGCCCCCCCACTGGAGGGTCATCTCTCCGCAGCTCAATCTACTTTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCCCCCCCACTGGAGGGTCATCTCTCCGCAGCTCAATCTACTTTCAT  150

seq1  GGGGACTGTGGCCATATTCTCCATCACTGCTCCTGTACATTTAGAAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTGTGGCCATATTCTCCATCACTGCTCCTGTACATTTAGAAGCAG  200

seq1  GCACACAACTGAAGCTGAGAACAGCTGTGTGGCCCCAGCAAGTCAGATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAACTGAAGCTGAGAACAGCTGTGTGGCCCCAGCAAGTCAGATGT  250

seq1  TGAAATTTCATTTCTTTATTCCTTAAATGAAAGGGAAGTTTTAGGTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTTCATTTCTTTATTCCTTAAATGAAAGGGAAGTTTTAGGTTGTT  300

seq1  CTAAAGTCTCTTCTAGAGTTATAGATATGATATGTCAGGAATCCTATAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTCTCTTCTAGAGTTATAGATATGATATGTCAGGAATCCTATAAC  350

seq1  ACTTACAAGTGAAAAGAAAAATATGAAATGGTTTAGATCTGTGACAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACAAGTGAAAAGAAAAATATGAAATGGTTTAGATCTGTGACAATTA  400

seq1  GAAAGTTTCCTATGTGGGAAGAAACAAGCGGAAGTTAACATATTTTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTTCCTATGTGGGAAGAAACAAGCGGAAGTTAACATATTTTAATT  450

seq1  TTATTACATTCTCTGTGTGTGTGTATGTGTGTGTGTGGGGGGG  493
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACATTCTCTGTGTGTGTGTATGTGTGTGTGTGGGGGGG  493