BAC Information

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BAC

Clone NameB6Ng01-041N01
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,568
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041N01.bB6Ng01-041N01.g
ACCDH868368DH868369
length1,278378
definitionDH868368|Mus musculus domesticus DNA, BAC clone: B6Ng01-041N01, 5' end.DH868369|Mus musculus domesticus DNA, BAC clone: B6Ng01-041N01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaaaacttataaacagcttcaatgaagtagctggatataaaat
taactcaaacaaatcaatggcctttctctacacaaagaataaacaggctg
agaaacaaattagggaaacaacacccatctcaatagtcacaaatagtata
aaatatcttggcatgactctaactaaggaagtgaaagatctgtatgataa
gaacttcaagtctctgaagaaagaaattaaagaagatctcagaagatgga
aagatctcccatgctcatggatttgcaggatcaatatagtaaaaatggct
atcttgccaatagcaatctacagattcaatgcaatccccatcaaaattcc
aactcaattcttcaacgaattagaaagagtaatctgcaaattcatttgga
ataacaaaaaaacctaggatagcaaaaactcttctcaaggataaaagtac
ctctggtggaatcaccatgcctgacctaaagctttactacagagcaattg
tgataaaaacggcatggtactggtataacaacagacaagtagaccaatgg
aatagaattgaagactcagaaatgaacccacacacctatggtcactgttc
tttgacaagggagttaaaaccatccagtggaaaaaagacagcattttcaa
aaaatggtgctggcacaactagtggttatcatgtagaagaatgtgaattg
atccattccaatctcctggtactaaggttaaatcaaagtggatcaagcca
cataaaaccagagacactgaaacttatagaggagaaagtgggaaaaaacc
tcgaagatataggcacagggggaaaaatttctgaatagaacagcaatggc
ttgtgctgaaagatcgagaatcgacaaatgggacctcatgaaactgcaag
cttcggtaaggcaaagacaccgtcaataagaaaaatgtcaccacagattg
ggaaaggatctttacctatcctaatcagttgaggactaatatccaatata
tataagaactcaaatcaataaccccataaaaaatggggctcagagataac
aaagattcctcactgaggaatacttgattggctgaggaacaaccgaaaat
gttcagcatcttatcatcagggaattgaaatttaaacactctggaaagtc
actctcacacgtcgaatgacttaaatctaatcatgtaagcaaaggcgtcg
ggagtgggtagagaccctcacgtatgaattcagactgtccaacctctgtg
aaactgacttgcgggttctcctaaatat
tttgttcagctctgagccccattttttaatgggttatttgattttctgga
gtccaccttcctgagttctttatatatattggatattagtcccctatctg
atttaggataggtaaagatcctattggatagatcacagggcccccaatgg
aggagctacagaaagtacccaaggagctaaagggatctgcaaccctatag
gtggaacaacaatatgaactaaccagtaccccggagctcttgactctagc
tgcatatgtatcaaaagatggcctagtcggccatcactggaaagagaggc
ccattggacttgcaaactttatatgccccagtacaggggaatgccagggc
caaaaagtgggagtgggtgggtagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870568
seq2: B6Ng01-041N01.g_228_450

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||| ||||||||||||| |||||| |||||||||||||| |||||||
seq2  ACAACAATATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150

seq1  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200
      |||| ||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGACTTGCAAACTTTATATGCCCCAGTACAGGGGAATGCCAGGGCCAAAA  200

seq1  AGGGGCAGTGGGTGGGTAGGGGA  223
      || || |||||||||||||||||
seq2  AGTGGGAGTGGGTGGGTAGGGGA  223