BAC Information

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BAC

Clone NameB6Ng01-043O23
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,575
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043O23.bB6Ng01-043O23.g
ACCDH869845DH869846
length995399
definitionDH869845|Mus musculus domesticus DNA, BAC clone: B6Ng01-043O23, 5' end.DH869846|Mus musculus domesticus DNA, BAC clone: B6Ng01-043O23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcactaaaaccatctggccctggactcattttggttaggagat
tttaatgactgcttctatttctgcagcagttattggactgtatagtttat
ctggtcccaatttaactttggaacatggtatttgtttagaaaatcatcca
tttcatctagattttccaggtttttttttttttgagtatatgcttttgta
gcagaatttgataatttttgaatttcctgtttctgttgttatgtcttcct
tttcatttccaaatttgttaatttgggtactgtctctatgccctttagtt
tgtttaagtgtttatctatcttgtagatttttttcaaagaactagctctt
aggttttttttgattctttgtatagttctctttgtttctaattggttgat
ttcaaccctgagtttgattatttcctgtagtctactcctcttgggtgtgt
ttgcttcttttttttccctagagctttcagatgtactgttaagttgctag
tgtaggatctctattagttttttatgaagacacacagtgctatcaatttt
cctcttagtgctgttttcattgtgtcccataagtctgggtatggcgtgcc
ttcatttttgttaaattctaaaaagtctttaatttcttccctgagcaagg
tatcattgagtagagttgttcagcttccatgtgtatgtggtttttttttt
ttttaattaaagaccagacttagtccctgatgatctaatagaatgcatgg
gacgaattcaatcttcttgtatctgttgagacttgttttgtgtccatttt
atatggtcagttttggattagtaccatgaagtgctaagaacaaagtctat
tcttttgtttttagggtgaaaggtctatagatatctgttaaatcattggt
tcataacttctgttagtttcactgtgtctggtttagtttctgttctatga
tctgtcattgatgagaatgggttgtgaagtctccacaatatttat
tcccataatcagcttccaaaagctgacaccattgcatacactagcaagat
tttgctgaaaggacccagatatagctgtctcttatgagactatgccgggg
cctagcaaacacagaagtggatgctcagagtcagctattggatggatcac
agggaccccaatggagaagctagagaaagtacccaaggaactaaagggat
ctgcaaccctataggtggaacaacattatgaactaaccagtaccccgaag
ctcttgactctagctgcatatgtatcaaaagatggcctagttggccatca
ctggaaagagaggctcattggacttgcaaactttatatgccccagtacag
gggaacgccagggccaaaaagtgggactgggtaagtaggggagtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870575
seq2: B6Ng01-043O23.g_243_472

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTAGAGAAAGTACCCAAGGAACTAAAGGGATCTGCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||||||||||||||||| ||||||  ||||||||||||| |||||||
seq2  ACAACATTATGAACTAACCAGTACCCCGAAGCTCTTGACTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | |||||||||||||||||||| |||||||||||||||||||||| ||||
seq2  ATGTATCAAAAGATGGCCTAGTTGGCCATCACTGGAAAGAGAGGCTCATT  150

seq1  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200

seq1  AGGGGCAGTGGGTGGGTAGGGGAGTGGGGG  230
      || || | |||||  |||||||||||||||
seq2  AGTGGGACTGGGTAAGTAGGGGAGTGGGGG  230