BAC Information

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BAC

Clone NameB6Ng01-044P19
ChromosomeY (Build37)
Map Location 1,544,846 - 1,544,929
singlet/doubletsinglet
Overlap genenone
Upstream geneUty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
Downstream geneLOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044P19.bB6Ng01-044P19.g
ACCDH870580DH870581
length611,152
definitionDH870580|Mus musculus domesticus DNA, BAC clone: B6Ng01-044P19, 5' end.DH870581|Mus musculus domesticus DNA, BAC clone: B6Ng01-044P19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
actctctctctctctttctctttctctctctctctctctctctctctctc
tctctctctct
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gattactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagttgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattggatggatcacatgggcccca
atgaagagctagagaaagtaccaaagaagctaaaggatctgcaccctata
gtgtaacaacattatgaactaccagtacccggagctcttgactctagctg
caatatgcatcaaaagatgctatcgcatcacttgaagagaggcaatgacc
gcactaatggccagtacaggtagcagtcataaagggaattggtggaaggc
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1544846_1544929
seq2: B6Ng01-044P19.b_51_110 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAG  50
                              ||||||||||||||| ||||||||||
seq2  ------------------------AGAGAGAGAGAGAGAGAGAGAGAGAG  26

seq1  AGAAAGAGAGAGAAAGAGAAAGAGAGAGAGAGAG  84
      ||| ||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAAAGAGAAAGAGAGAGAGAGAG  60