BAC Information

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BAC

Clone NameB6Ng01-047J15
ChromosomeY (Build37)
Map Location 573,405 - 573,627
singlet/doubletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047J15.bB6Ng01-047J15.g
ACCDH872420DH872421
length1,160937
definitionDH872420|Mus musculus domesticus DNA, BAC clone: B6Ng01-047J15, 5' end.DH872421|Mus musculus domesticus DNA, BAC clone: B6Ng01-047J15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaacaggtaagaaggacacaggctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccatagccagggatccacccc
ataatcagcatccaaacgctgacaccattgcatacactagcaagatttta
ttgaaaggacgcagatgtagctgtctcttgtgagactatgccggggccca
gcaaacacagaagtggatgctcacagtcagctatggatgatcatagggct
ccaatgaggagctagagaagtagcagagctaaagggatctgcaacctata
gtgacacattatgagctaccagtaccccgagctcttgactctagctgcta
atatatcaaagatgcctagtcggcatccctgcaagaaagccatgacttgc
cacctttatgccagtacaggaattcagggctaaaagaaatgtgttgctac
agcgatggcg
gaattctttgtttagctctgtaccacatttttaaatagggttgtttagtt
ttctggagtccaacttcttgaattcttcatatatattggatattagcccc
ttgttggatttaggattggtaaagatcttttccctatcttttgattgtgt
tttagccttattgacagtgccctttgccttacaaaagctttgtaatttta
tgaggtcccatttgtcgattcttttttttttctttttccaatttttatta
gttattttcttcatttacatttcaaatgctatcctaaaagttccctatac
cttccccccaccctgatcccctacccactcactctcacttcttggccctg
gtgttcccctgtactggggcacataaagtttgcaagaccaaggggcctct
cttcccaatgatggccaactaggccatcttctgctacatatgtagctaga
gacacgagctctgttggtactgattagttcatattgttgttccacctata
aggttgcagaccccttcagctccttggatactttctctagctcctacatt
gggggacctgtgatccatccaatagctgactgtgagcattcacttctatg
tttgccaggaactggcatagcctcacaagagactgctatatcagtgtcct
ttcagcgaaatcttgctggcatatgcaatagtgtctgtgtttggtggctg
attatgggatggatccctgggtgtggcagtctcagaatggtccatccttt
tgtctcagctccaaactttgtctctttaactctttccatcttgatcttac
agcacacgccattagtgttctgttcaggaatctttcccttgtgcccatgt
ctttgaggctctttcacatttctcctctattagtttcagtgtccctggtt
tatgtgcagttctttgatccacttatactgagctttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573405_573627
seq2: B6Ng01-047J15.g_306_528 (reverse)

seq1  ACAGAGCTCATGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGG  50
      ||||||||| ||||||||||| |||||||| |||||||||||||||||||
seq2  ACAGAGCTCGTGTCTCTAGCTACATATGTAGCAGAAGATGGCCTAGTTGG  50

seq1  CCATCATTGGGAAGAGAGGCCCCTTGGTCTTGCAAACTTTATATGCCCCA  100
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCATCATTGGGAAGAGAGGCCCCTTGGTCTTGCAAACTTTATGTGCCCCA  100

seq1  GTACAGGGGAACACCAGGGCCAAGAAGTGGGAGAAGGTGGGTAGGGTAGC  150
      ||||||||||||||||||||||||||||| |||   |||||||||| | |
seq2  GTACAGGGGAACACCAGGGCCAAGAAGTGAGAGTGAGTGGGTAGGGGATC  150

seq1  AAGGCAGGGGGAGGATATAGGGGACTTTTGGGATAGCATTTGAAATGTAA  200
      | ||  |||||| | ||||||| |||||| ||||||||||||||||||||
seq2  AGGGTGGGGGGAAGGTATAGGGAACTTTTAGGATAGCATTTGAAATGTAA  200

seq1  ATGAAGAAAATAACTAATAAAAA  223
      |||||||||||||||||||||||
seq2  ATGAAGAAAATAACTAATAAAAA  223