BAC Information

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BAC

Clone NameB6Ng01-055O20
ChromosomeY (Build37)
Map Location 573,321 - 573,495
singlet/doubletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055O20.bB6Ng01-055O20.g
ACCDH878240DH878241
length1,041494
definitionDH878240|Mus musculus domesticus DNA, BAC clone: B6Ng01-055O20, 5' end.DH878241|Mus musculus domesticus DNA, BAC clone: B6Ng01-055O20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttgggtaaataccaagtagttttatgctaggtctaatttcga
tttcaatttctttttgaggaaagtttttactgatttccatagcagctaat
gtaaagtttacatccttagcagcagtgtaaaggagttctctttggtctga
atctttgccagcattgctctttttttttttttaaatataaaaatattcaa
acttataattgctgttaaaattttttcttaaaactatagtaatataattc
cattattttccacttttctttcctcccttcaatccccctcatgtatctca
aatacatggcctttttctttaattgtttatatgtatatgtacatgtatat
gtatattcctaaatatgtaaataaaattaccttggtcaatataatgttac
ctgtattcatatgatcctagtgctgagcactgggagtggataacctgttt
agtatgttcttttcgtggaagaacatttcttccagtatcagtgttttttg
gttgcctgtagttctttgtccatgcttgagactctggagagctttcccct
gtgcgtgttagcatacacatcagtgtcatcaatgtagatccctaaacaag
acctgggcaaaggtgataccaatggttttgcttacttagtgccattctga
gtggagtgagatggaatctttaatggagtttggttttgtatttctctgat
ggctaatgatgttaaacttttcctcatatgctcatttaccaccctttttt
ttgagaactgtctacttatttcattagcacatttgcttattaggttactt
gatttcttttttagttttcttgaggatctgtatgtctattatctatctag
atatagatgacagagataagaatgagacagatatatagatatatgtagag
atataggttgtatagatagatatataggtataattcgtagcatgagatga
atagcgtgctcaagtagaatctgattcgatgatctcagtcatgagaagac
tgcatggatattagtcagctatgagcacgggcataggatag
caaaacacatgaaactcaagaagaacgaagacaaaagtgtggacacttcg
ccccttcttagaattgggaaaaaatacccatggaaggagttacagagaca
aagtttggagctgagacaaaaggatggaccatctagagactcctgcaccc
ggggagccatcccataatcagcctccaaatgtagacaccactgcatacgc
cagcaagattttgctgaaaggaccctgatatagctgtctcttgtgaggct
acgccagggcctagcaaacacagaagtggacgcttacagtcagctattgg
atggaacacagggcccccaatggaggagctagagaaagtacccaaggagc
taaaggggtctgcaaccctataggtagaacaacaatatgaactaaccatt
acccccagagctcgtgtctctagctgcatatgtagcagaaggtggcctag
tcaccattactgggaagagaggccccttggttttacaaacttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573321_573495
seq2: B6Ng01-055O20.g_392_566

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCT  50
      |||||||||||||||||||||||||||||||||||||| ||||||| |||
seq2  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGGTCTGCAACCCT  50

seq1  ATAGATGGAACAACAATATGAA-TAACCAGTATCCACAGAGCTCATGTCT  99
      |||| | ||||||||||||||| |||||| || || |||||||| |||||
seq2  ATAGGTAGAACAACAATATGAACTAACCATTACCCCCAGAGCTCGTGTCT  100

seq1  CTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATTGGGAAGA  149
      ||||||||||||||| |||||| |||||||| |  |||| | ||||||||
seq2  CTAGCTGCATATGTAGCAGAAGGTGGCCTAG-TCACCATTACTGGGAAGA  149

seq1  GAGGCCCCTTGGTCTTGCAAACTTTA  175
      ||||||||||||| || |||||||||
seq2  GAGGCCCCTTGGTTTTACAAACTTTA  175