BAC Information

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BAC

Clone NameB6Ng01-058C15
ChromosomeY (Build37)2 (Build37)
Map Location 1,870,364 - 1,870,452151,104,970 - 151,105,178
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058C15.bB6Ng01-058C15.g
ACCDH879817DH879818
length500209
definitionDH879817|Mus musculus domesticus DNA, BAC clone: B6Ng01-058C15, 5' end.DH879818|Mus musculus domesticus DNA, BAC clone: B6Ng01-058C15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(1,870,364 - 1,870,452)(151,104,970 - 151,105,178)
sequence
gaattctatgtactcactgataagtggatattatcccaaaacttaggata
cccaagaaataagatacaattttctaaacgcatgaaactcaagaagaatg
aagaccaaagtggggacactgtgacccttcttagaattgggaagaaaaca
cccatggaaggagttacagagacaacgtttggagctgtgacaaaagaatg
gaccatctagagactgccatatccagggatccaccccataatcagcttcc
aaatgctgacaccattgcatacactagcaaggtttttctgaaaggtccca
gatatagctgtctcttgtgagactaggccagggccttgcaaacacagaat
tggatgctcacagtcagctattggatggatcacagggctatcaatggagg
agctattgaaagagctaaagggatctgcaaccccataggtggaacaacat
tctgaactaaccagtaccccggagctcttgactctagctgcatatgtatc

cagatgtgtcaattgcacagttgtttaggttctaggaagaagggaatgtg
tttatacatgagagaaaattgaatattggcaatatagtagagaaaacgag
gtttaaagatcctacagtatggccgagtaagttctgaagtacagataaat
agctaaaaacataaaagattgcccagtcagccctttttcgggggagggag
ggagggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870364_1870452
seq2: B6Ng01-058C15.b_461_549

seq1  GAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAAC  50
      |||||||||||||||||||||| ||||||||||||||||| |||||||||
seq2  GAGCTAAAGGGATCTGCAACCCCATAGGTGGAACAACATTCTGAACTAAC  50

seq1  CATTACCCCTGAGCTCTTGACTCTTGCTGCATAGGTATC  89
      || |||||| |||||||||||||| |||||||| |||||
seq2  CAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATC  89

seq1: chr2_151104970_151105178
seq2: B6Ng01-058C15.g_72_280

seq1  CAGATGTGTCAATTGCACAGTTGTTTAGGTTCTAGGAAGAAGGGAATGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTGTCAATTGCACAGTTGTTTAGGTTCTAGGAAGAAGGGAATGTG  50

seq1  TTTATACATGAGAGAAAATTGAATATTGGCAATATAGTAGAGAAAACGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACATGAGAGAAAATTGAATATTGGCAATATAGTAGAGAAAACGAG  100

seq1  GTTTAAAGATCCTACAGTATGGCCGAGTAAGTTCTGAAGTACAGATAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAGATCCTACAGTATGGCCGAGTAAGTTCTGAAGTACAGATAAAT  150

seq1  AGCTAAAAACATAAAAGATTGCCCAGTCAGCCCTTTTTCGGGGGAGGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAAAACATAAAAGATTGCCCAGTCAGCCCTTTTTCGGGGGAGGGAG  200

seq1  GGAGGGATG  209
      |||||||||
seq2  GGAGGGATG  209