BAC Information

Click to search

BAC

Clone NameB6Ng01-061M17
ChromosomeY (Build37)
Map Location 1,870,356 - 1,870,572
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061M17.bB6Ng01-061M17.g
ACCDH882376DH882377
length1,181307
definitionDH882376|Mus musculus domesticus DNA, BAC clone: B6Ng01-061M17, 5' end.DH882377|Mus musculus domesticus DNA, BAC clone: B6Ng01-061M17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcacccctttccccctcccttacacttctgagagggtaattcc
ccacccacacatctgcccacacctcaccaccaccagcattctttttcatt
gggcatcaaatgtccacaggattaagagcatccttacccactcaggtcag
acaaggcagtcctctgctacatatctgccttgggtcactaaccagtccat
ggatgcaccttggttttggcttagtgtctgggagctctgaggggtccaat
tagttgatgctgttattttccctatggagttgcaattcccttcagcttct
tcagtcctttctcaaactcttccatattggtccccaacctcaatctagtg
gttggttatacatatctacatttgtttcagtcagttgctggtagagaatc
tcagagagcagccatgctaggctcttcttcacacacaaaacatggcatca
gtaatagtgtcaggatttggtgtgtgcacaggggatgaatcacaagttgg
gctagtcactggttggccttttttcagtctctgctacatttttgtccctg
tatttcctttacatagtaacaattctaagttaattttgaatatggatgtg
tggccctatgcctcaactgaagtgcatgtctatctactagaggtagtctc
ttcaggttccatttctccacttttggccattttatctaatgtacacatta
aatcctggtagcctctcacatcccaggtctctgggactttctagtggttc
cccctgtcacccaacccccactgatgcatatttttttctgaccagcctta
aaagtatacgttaactatgttctacctgtcttggttatagatcattggtt
tctaaattattgggtatggttaaaatctataatacttacacaacaacaca
acaaaatgacttaaacagtaactcagcagttaagccattctaagcacagc
catgtcataactgaccaaggacaggtctaaattgaggatgggccaattca
gagaaggacagcagtccaacaaactggacctctgaaattcctcaaactga
gccccaaccaggtagcatatactactgatcaggtccctgacagaaagcca
gactgcctgtctgctctcaggagaagatgcactatctcttggagctttga
gctcaggagtgagcacagtgtgttggggaga
tttgtttagatctgtatgccatttttaatagggttatttcattctctgga
gtggaacttcttgagttctttgtatatatgggataccctatacccaagga
gctaaagggatctgcaaccctataggtggaacaacattatgaactaacca
gtaccccggagctcttgactctagctgcatatgtatcaaaagatgaccta
gtcggccatcactggaaagagaggcccattggacacgcaaactttatatg
tcccagtacaggggaacgccagggccaaaaagcgggagtgggtgggtagg
ggagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870356_1870572
seq2: B6Ng01-061M17.g_167_383

seq1  TACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTAT  50

seq1  GAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCATAGGTATCAAA  100
      |||||||||| |||||| |||||||||||||| |||||||| ||||||||
seq2  GAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAA  100

seq1  AGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACATGCAA  150
      ||||| ||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGATGACCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACGCAA  150

seq1  ACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGCAGTG  200
      |||||||||| ||||||||||||||||||||||||||||||| || ||||
seq2  ACTTTATATGTCCCAGTACAGGGGAACGCCAGGGCCAAAAAGCGGGAGTG  200

seq1  GGTGGGTAGGGGAGTGG  217
      |||||||||||||||||
seq2  GGTGGGTAGGGGAGTGG  217