BAC Information

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BAC

Clone NameB6Ng01-067P20
Chromosome12 (Build37)Y (Build37)
Map Location 78,413,450 - 78,414,4861,494,285 - 1,494,314
singlet/doubletsingletsinglet
Overlap geneFut8
Upstream geneMthfd1, Akap5, Zbtb25, Zbtb1, Hspa2, Gm70, LOC100041694, Plekhg3, Spnb1, Churc1, Gpx2, Rab15, Fntb, Max, LOC100041765, LOC100041772
Downstream geneLOC230765, LOC666659, EG626215, Gphn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067P20.bB6Ng01-067P20.g
ACCDH886710DH886711
length1,036717
definitionDH886710|Mus musculus domesticus DNA, BAC clone: B6Ng01-067P20, 5' end.DH886711|Mus musculus domesticus DNA, BAC clone: B6Ng01-067P20, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(78,413,450 - 78,414,486)(1,494,285 - 1,494,314)
sequence
gaattctcaagtgttttggcccaggttgttttattggttgtgttagtaaa
ttaaagagtcagacaagcaatgctttgattctgtgttttttgactctttg
cagtctttctgtgctttttaggatattgagttgcatctgactcacataga
ccttacatattctgggtttttcaagtaaattcttactcaaattgctttaa
atcgtaactttaaaattccgtgtttgcaagaatacatttcattcttagca
ctggtatctttagtcctcagatcttcctggctccagcatttttggttatt
cttttgggctaagccgctctaattttaatacccatagttctgttcattct
ccagcgaggtcaccagagttttgttgttgttaatgaaaaagtcattgttc
aagtctcttctttttaggagcatgctcagactgaatgaagctaaaatttc
ttaggaatactctgccttacatacaagatacaattttgcatattttaaat
tcaacctatttgctagtacaatgatgttatttatatctcagaatttcaaa
tgcattgttaagacttgagaggcttttaccaacaccctccattttacttc
tcctttcaccattctcagtgttttctgaagaaccgttgggtcttaccaga
gtttgagttttgcctttcataattacaaaatgagaagaaaagggacattc
ttagaagttggaagcaatgcaaatacagagaagaaaattcacactcattt
ctgttactcctcttttattgagaaaaatcttgacttaatgtactttactt
tgctcagggattggtggcaatggtgataattattgtgatgggtcgaagta
attgtaggagtgcatttaaaagagacttaattatttaattataatatata
atatataaaatatttaatttggagataatcttaaaatagatatttcaaag
tggtgtatattttataatgtatagattattatatatcaaatgttctacaa
taaagttgtggggaaaaagagagaattgatatgggt
gaattcctgatctttccaagacttctatcatgaagggtgttgtattttgt
caaatgctttttcagcatctaatgagataatcatgcgtttttttttcttt
gcatttgtttatatagtgcattacattgatggatttctgtatattaaatc
atccctgcatccctgaatgaactctacttgatcatggtaaatgatcattt
tgatgtgctcttggattcagtttgtgagaattgtattaagtatttttgca
ccaatatttataagggaaattggtctgaagttctcttttttaagtctttg
tgtggtttagctattagcataactgtggcttcatagaatgaattaggtag
tgtttcttctgtttctattttgtggaatagtttgaagagtattggtgtta
ggtcttctttgaaggtctgatagaattctgcactaaaacaccatctgatc
ctgggctttttttttttttttttttttttttttttggttaggaaacttgt
aatgatggtttttatttctttaggggttatggaactgtttagataaccac
ctgatcctgatttaactttggtacctggtatatgtctagaaaatcatcca
ttccatctagattttccagtttttgttgagtaccggcttttgtagtagga
tatgataatttttaaaatttctttagtttctgttgttctgtctccctttt
cacttctgaatttatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_78413450_78414486
seq2: B6Ng01-067P20.b_48_1083

seq1  GAATTCTCAAGTGTTTTGGCCCAGGTTGTTTTATTGGTTGTGTTAGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAGTGTTTTGGCCCAGGTTGTTTTATTGGTTGTGTTAGTAAA  50

seq1  TTAAAGAGTCAGACAAGCAATGCTTTGATTCTGTGTTTTTTGACTCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGTCAGACAAGCAATGCTTTGATTCTGTGTTTTTTGACTCTTTG  100

seq1  CAGTCTTTCTGTGCTTTTTAGGATATTGAGTTGCATCTGACTCACATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTCTGTGCTTTTTAGGATATTGAGTTGCATCTGACTCACATAGA  150

seq1  CCTTACATATTCTGGGTTTTTCAAGTAAATTCTTACTCAAATTGCTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACATATTCTGGGTTTTTCAAGTAAATTCTTACTCAAATTGCTTTAA  200

seq1  ATCGTAACTTTAAAATTCCGTGTTTGCAAGAATACATTTCATTCTTAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTAACTTTAAAATTCCGTGTTTGCAAGAATACATTTCATTCTTAGCA  250

seq1  CTGGTATCTTTAGTCCTCAGATCTTCCTGGCTCCAGCATTTTTGGTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATCTTTAGTCCTCAGATCTTCCTGGCTCCAGCATTTTTGGTTATT  300

seq1  CTTTTGGGCTAAGCCGCTCTAATTTTAATACCCATAGTTCTGTTCATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGGCTAAGCCGCTCTAATTTTAATACCCATAGTTCTGTTCATTCT  350

seq1  CCAGCGAGGTCACCAGAGTTTTGTTGTTGTTAATGAAAAAGTCATTGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCGAGGTCACCAGAGTTTTGTTGTTGTTAATGAAAAAGTCATTGTTC  400

seq1  AAGTCTCTTCTTTTTAGGAGCATGCTCAGACTGAATGAAGCTAAAATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCTTCTTTTTAGGAGCATGCTCAGACTGAATGAAGCTAAAATTTC  450

seq1  TTAGGAATACTCTGCCTTACATACAAGATACAATTTTGCATATTTTAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAATACTCTGCCTTACATACAAGATACAATTTTGCATATTTTAAAT  500

seq1  TCAACCTATTTGCTAGTACAATGATGTTATTTATATCTCAGAATTTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTATTTGCTAGTACAATGATGTTATTTATATCTCAGAATTTCAAA  550

seq1  TGCATTGTTAAGACTTGAGAGGCTTTTACCAACACCCTCCATTTTACTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGTTAAGACTTGAGAGGCTTTTACCAACACCCTCCATTTTACTTC  600

seq1  TCCTTTCACCATTCTCAGTGTTTTCTGAAGAACCGTTGGGTCTTACCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCACCATTCTCAGTGTTTTCTGAAGAACCGTTGGGTCTTACCAGA  650

seq1  GTTTGAGTTTTGCCTTTCATAATTACAAAATGAGAAGAAAAGGGACATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGTTTTGCCTTTCATAATTACAAAATGAGAAGAAAAGGGACATTC  700

seq1  TTAGAAGTTGGAAGCAATGCAAATACAGAGAAGAAAATTCACACTCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGTTGGAAGCAATGCAAATACAGAGAAGAAAATTCACACTCATTT  750

seq1  CTGTTACTCCTCTTTTATTGAGAAAAATCTTGACTTAATGTACTTTACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACTCCTCTTTTATTGAGAAAAATCTTGACTTAATGTACTTTACTT  800

seq1  TGCTCAGGGATTGGTGGCAATGGTGATAATTATTGTGATGGGTCGAAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGGGATTGGTGGCAATGGTGATAATTATTGTGATGGGTCGAAGTA  850

seq1  ATTGTAGGAGTGCATTTAAAAGAGACTTAATTATTTAATTATAATATATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGGAGTGCATTTAAAAGAGACTTAATTATTTAATTATAATATATA  900

seq1  ATATATAAAATATTTAATTTGGAGATAATCTTAAAATAGATATTTCAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAAAATATTTAATTTGGAGATAATCTTAAAATAGATATTTCAAAG  950

seq1  TGGTGTATATTTTATAATGTATAGATTATTATATATCAAATGTTCATCAA  1000
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  TGGTGTATATTTTATAATGTATAGATTATTATATATCAAATGTTCTACAA  1000

seq1  TAAAGTTGTTGGGGAAAAAGAGGAGAA-TGATATGGGT  1037
      |||||||| |||||||||||| ||||| ||||||||||
seq2  TAAAGTTG-TGGGGAAAAAGA-GAGAATTGATATGGGT  1036

seq1: chrY_1494285_1494314
seq2: B6Ng01-067P20.g_528_557

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTGGTT  30
      ||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTTTTTGGTT  30