BAC Information

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BAC

Clone NameB6Ng01-085P23
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,571
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085P23.bB6Ng01-085P23.g
ACCDH899512DH899513
length1,182476
definitionDH899512|Mus musculus domesticus DNA, BAC clone: B6Ng01-085P23, 5' end.DH899513|Mus musculus domesticus DNA, BAC clone: B6Ng01-085P23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttctttg
atccatttagatttgaccttagtacaaggagataagtatggatcaattcg
cattcttctacatgataacaaccagttgtgccagcaccaattgttgaaaa
tgctgtctttcttccactggatggttttagctcccttgtcgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgtctctataccagtaccatgcagtttttaccacaattg
ctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttgctatcctaggttttttgttattccagat
gaatttgcaaattgctccttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatctttaatttctttcttcagagacttgaagtttttatcataca
gatctttcacttccttagttagagtcacgccgagatattttatattattt
gtgactattgagaaggtgtgtttccctaatgtttctcagtctatttattc
tttgttgtagagaaaggccattgactgtttgaggtattattatcagccta
cttcaccagctgttttcaggttagggagttcccggtgattttaggtcact
taataactactatactctgcatagtggagatttgactcccttcaatggat
ctgatcctggtgccaatggtcttggggctatg
taaactgaggaatactgaatggctgagaagcacccgaaaaaatgttcaac
atccttagtcatcaggggaaatgcaaatcaaaacaaccctgagattccac
ctcataccagtcagaatggctaagatcagattttattgaaaggacccaga
tgtagctgtctcttgtgagactatgccggagcctagcaaacacagaagtg
gatgctcacaatcagctaatggatggatcacagggctcccaatggaggag
ctagagaaagtacccaaggagctaaagggatctgcaaccctataggtgga
acaacattatgaactaaccagtaccccggagctcttgactctagctgcat
atgtatcaaaagatggcctagtcggccatcactggaaagagaggcccatt
ggacatgcaaactttatatgccccagtacaggggaacgccagggccaaaa
agggggagtgggtgggtaggggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870571
seq2: B6Ng01-085P23.g_326_551

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||||||||||||||||| |||||| |||||||||||||| |||||||
seq2  ACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150

seq1  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200

seq1  AGGGGCAGTGGGTGGGTAGGGGAGTG  226
      ||||| ||||||||||||||||||||
seq2  AGGGGGAGTGGGTGGGTAGGGGAGTG  226