BAC Information

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BAC

Clone NameB6Ng01-089L09
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,572
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089L09.bB6Ng01-089L09.g
ACCDH902218DH902219
length466464
definitionDH902218|Mus musculus domesticus DNA, BAC clone: B6Ng01-089L09, 5' end.DH902219|Mus musculus domesticus DNA, BAC clone: B6Ng01-089L09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgtatatattggatattagggaacggccacatgcaggattggtaaaga
tcttttcccagtctgaaggagtaattttgtcctattgacagtgtcctttg
tcttacagaaactttgcaattttatgaggtcccatttgtcctctcttgat
cttatagcataaatttttgatgttctgttcaggaaaatttcccctgtact
catgtgttcaatgttttccccaactttctcttctataagattcagtcagt
gtatctggttttattagaatcactatatcagatttctctgtggatccatt
tgcgtagaaaaatctttttccaacactttactatgaagtaatgcctattg
ttgatgatggggtatgtttctttttttcagcagaagaatggatcctgttt
tgtggagggttctcttcacccgcgacattttttctggacaattggctccc
ttgatatttagagaca
cggaatttgtaacctgttatctccatttttaaataggaccatctagagcc
tgaaaaaaagggatccatcccataattagcttccaaacgctgacaccatt
gcatatactagcaagattttgctgaaatctacccagatatagctgtctct
tgtgagactatgccagggcctagcaaacacagaagtggatgctcacagtc
agctattggatggatcacagggcccccaatggaggagctagagaacgtat
ccaaggagctaaagagatctgcaaccctgcaggtgcaacaacattatgat
ctaatcagtaccccggagctcttgactctagctgcatatgtatcaaaaga
tggcctagttggccatcactgcaaagagaggcccattggacaggcaaact
ttatatgccccagtacaggggaatgccagggccaaaaaatgggaatgggt
gggtaggggagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870572
seq2: B6Ng01-089L09.g_305_531

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      |||||||| ||| |||||||||||||| |||||||||||||  ||||| |
seq2  CTAGAGAACGTATCCAAGGAGCTAAAGAGATCTGCAACCCTGCAGGTGCA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||||||||| |||| || |||||| |||||||||||||| |||||||
seq2  ACAACATTATGATCTAATCAGTACCCCGGAGCTCTTGACTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | |||||||||||||||||||| ||||||||||| |||||||||||||||
seq2  ATGTATCAAAAGATGGCCTAGTTGGCCATCACTGCAAAGAGAGGCCCATT  150

seq1  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200
      ||||| |||||||||||||||||||||||||||||| |||||||||||||
seq2  GGACAGGCAAACTTTATATGCCCCAGTACAGGGGAATGCCAGGGCCAAAA  200

seq1  AGGGGCAGTGGGTGGGTAGGGGAGTGG  227
      |  || | |||||||||||||||||||
seq2  AATGGGAATGGGTGGGTAGGGGAGTGG  227