BAC Information

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BAC

Clone NameB6Ng01-091L09
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,496
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091L09.bB6Ng01-091L09.g
ACCDH903662DH903663
length4941,145
definitionDH903662|Mus musculus domesticus DNA, BAC clone: B6Ng01-091L09, 5' end.DH903663|Mus musculus domesticus DNA, BAC clone: B6Ng01-091L09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
acttgttcaaaagatttgcaatgcagttaagttctgaagaagactggcag
gtgtttaaaatgggcaaaccttcttagaattgggaacaaaacacccatgg
aaggagttacagagacaaagtttggagctgagaaaaaaggatggaccatc
tagagactgccgtatccagggatccatcacataatcagcctccaaacgct
gacaccattgcatacactagcaagattttgctgaaaggaccctgatatag
ctgtctcttgtgagactaggccggggcctagcaaacacagaagtggatgc
tcacagtcagctagtggatgggtcacagggcccccaatggaggagctaga
gaaagtaaccaaggagctaaagggatctgcaaccctataggtggatcaac
attatgaactaaccagtaccctggagctcttgattctagctgtatgtatc
aaaagatggcctagtctgccatcactggaaagagaggcccattg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
tggagagctagagaagtactcaaggagctaaagggatctcaccctatagg
tggaacacatatgactaaccagtacccttgagctctgactctagctgcat
atgtatcaaagatgctagtcgcatcctgaaagagagtccatgaccgcgac
ttggtgccggtaaggacgcaggccaagggggggagagtggtgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870496
seq2: B6Ng01-091L09.b_399_547

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAAAGTAACCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
       ||||||||||||||||||| |||||  |||||||||| ||| ||||  |
seq2  TCAACATTATGAACTAACCAGTACCCTGGAGCTCTTGATTCTAGCTG--T  98

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | ||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATGTATCAAAAGATGGCCTAGTCTGCCATCACTGGAAAGAGAGGCCCATT  148

seq1  G  151
      |
seq2  G  149