BAC Information

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BAC

Clone NameB6Ng01-102D20
ChromosomeY (Build37)
Map Location 1,120,571 - 1,121,066
singlet/doubletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102D20.bB6Ng01-102D20.g
ACCDH911187DH911188
length7121,217
definitionDH911187|Mus musculus domesticus DNA, BAC clone: B6Ng01-102D20, 5' end.DH911188|Mus musculus domesticus DNA, BAC clone: B6Ng01-102D20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttttttccttttttttttttttattttttattaggtatttag
ctcatttacatttccaatgctataccaaaagtcccccatacccacccacc
cccactcccctacccacccactccccctttttggccctggcattcccctg
tactggggcatataaagtttgcaagtccaatgggcctctctttccagtga
tggccgactaggccatcttttgatacatatgcagctagagtcaagagctc
aggggtactggttagttcataatgttgttccacctatagggttgcagatc
cctttagctccttggctactttctctagctcctccattgggagccctgtg
atccatccattagctgactgtgagcatccacttctgtgtttgctaggccc
cggcatagtctcacaagagacagctacatctgggtcccttcgataaaatc
ttgctagtgtatgcaatggtgtcagcgtttggatgctgattatggggtgg
atccctggatatggcagtctctacatggtccatcctttcatctcagctgc
aaactttgtctctgtaactccttccaagggtgttttgttcccacttctaa
ggaggggcatagtgtccacacttcagtcttcattttcttttgagtttcat
gtgtttaggaaattgtatcttatatcttgggtatcctaggttttgggcta
aatatccactta
gaattcaagtattatattgaatacgtagggagagagtggaaagccttgtc
tagtctctgactttagtaggattgctttagtttctctccatttagtttga
tgttggctattggtctgctgtatatttcttttaatatatttaggtatggg
ccttatcttcctgatctttccaagaattctgccatgaagcaatgttggat
tttgtcaaatgctttctcaccatctactaaaatgatcacatgtatttttt
tctttgagttcatttatatagtggattacactggtggatttccatatatt
gaatcatctttgcgtccctgggttgaagcctacttgatcatgatggatga
tcattttgacatgttcttggattcgttttgttaaaattttattgagtatt
ttccatagatattgataagggaaattagtctgtagttctccttttttggt
cattgtgtgttttaggtatcagagtaattgtggcttataaaatgaattgg
gttgtgttccttctatttctattttgtggaatagtttgaagagtattgat
attaggtcttcattgaaggtgtggtagaaatctgccctaaacccatctgg
tcctgtgatttttgtgcttgggaggttatttgtgattctatttctctagg
gtttatgaaaatgtttaaatggtttatctgatcctgatttaattttggta
ccttgcatttatctagaaaattgtccatttcatccagattttccagtttt
gttgaatataactttttgtagttggatttgatgatttttgtatttcttca
gtttctgttgttatctctccccttttcttttctgattttattaatttgga
tactgtctctgtgcccttttggtttgtctgcctaagggtttatctatctt
gttgattttttcaaagaaacagctcctggtttggttgattctttgatagt
cttttatttctactggttgattttaccctgagtttgattattcgtgcatc
tacttctttttgggtgtatttgcttcattttaaatagagctttcagtgtg
gttgtcggctgttaggaatgccttcctccaggttctttttggaagcactc
tagagctctgattttccctctagaccatacaatccaagtcaaagtttggg
tatggtaagcctattcctaatctcaaggcctttatttcaccttattacct
tccctgagcacagttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120571_1121066
seq2: B6Ng01-102D20.b_48_541

seq1  TTTTTTTTTTTTTAATTTTTTTTTCCATTTTTTATTAGGTATTTAACTCA  50
      ||||||||  |||  |||||||||  ||||||||||||||||||| ||||
seq2  TTTTTTTTCCTTT--TTTTTTTTTTTATTTTTTATTAGGTATTTAGCTCA  48

seq1  TTTACATTTCCAATGCTATACCAAAAGTCCCCCATATCCACCCACCCCCA  100
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCCA  98

seq1  CTCCCCTGCCCACCCACTCCCCCTTTTTGGCCCTGGTATTCCCCTGTACT  150
      ||||||| |||||||||||||||||||||||||||| |||||||||||||
seq2  CTCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCATTCCCCTGTACT  148

seq1  GGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGC  198

seq1  CGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAAGAGCTCCGGG  250
      ||||||||||||||||||||| |||||||||||||||||||||||| |||
seq2  CGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCAGGG  248

seq1  GTACTGGTTAGCTCATAACGTTGTTCCACCTATAGGGTTGGAGATCCCTT  300
      ||||||||||| |||||| ||||||||||||||||||||| |||||||||
seq2  GTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTT  298

seq1  TAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCTATGATCC  350
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCC  348

seq1  ATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTGGGCCCCGGC  400
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGC  398

seq1  ATAGTCTCACAAGAGACAGCTACATCTGCCTCCTTTCAATAAAATCTTGC  450
      ||||||||||||||||||||||||||||  ||| ||| ||||||||||||
seq2  ATAGTCTCACAAGAGACAGCTACATCTGGGTCCCTTCGATAAAATCTTGC  448

seq1  TAGTGTATGCAATGGTGTCAGCGTTTGGATGCTGATTATGGGGTGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTATGCAATGGTGTCAGCGTTTGGATGCTGATTATGGGGTGG  494