BAC Information

Click to search

BAC

Clone NameB6Ng01-111P04
ChromosomeY (Build37)
Map Location 573,322 - 573,464
singlet/doubletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111P04.bB6Ng01-111P04.g
ACCDH918148DH918149
length1,152499
definitionDH918148|Mus musculus domesticus DNA, BAC clone: B6Ng01-111P04, 5' end.DH918149|Mus musculus domesticus DNA, BAC clone: B6Ng01-111P04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcccaa
tggaggagctagagaaagtacccagagctaaagggatcttcaccctataa
gtgacacatatgactaccagtaccctgagctctgactctagctgcatatg
tatcaaaagatggcctagtcgcatcactgaagagaggccaatgacacgca
aactttgtgttcccgtacaggtcgccaggtcaaaagtgaaattgtttgtt
ag
gaattcccatgagacaagatacaatctgcagaacacatgaaactcaagaa
gacagaagaccaaaatgtggacattttaccccttcttagaattgggaaca
aaacacccatggaaggagttacagagacaaagtttggagctgagatgaaa
ggatggaccatctagagactgccatagctggggttccatcccataatcag
cctccaaacgctgacaccattgcatacactagcaagattttgctgaaagg
acccagatatagctgtctgttgtgaggatttgcagggacctagcaaacag
tagtggatcttcacagttagttattggatggattatagggccaccagtgg
aggagctagagaaagcacccaaggagcaaaaggggtctgcaacccgatag
atggaacaacaatatgaactaaccagtacccccccccccccagagttcgt
gtctctagctgcatatgtagtagaagatgacctagttggtcatcattgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573322_573464
seq2: B6Ng01-111P04.g_418_569

seq1  TGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCTA  50
      |||||||||||||||||| ||||||||||| |||||| ||||||| || |
seq2  TGGAGGAGCTAGAGAAAGCACCCAAGGAGCAAAAGGGGTCTGCAACCCGA  50

seq1  TAGATGGAACAACAATATGAA-TAACCAGTA--------TCCACAGAGCT  91
      ||||||||||||||||||||| |||||||||         || ||||| |
seq2  TAGATGGAACAACAATATGAACTAACCAGTACCCCCCCCCCCCCAGAGTT  100

seq1  CATGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATT  141
      | ||||||||||||||||||||  |||||||| ||||||||| |||||||
seq2  CGTGTCTCTAGCTGCATATGTAGTAGAAGATGACCTAGTTGGTCATCATT  150

seq1  GG  143
      ||
seq2  GG  152