BAC Information

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BAC

Clone NameB6Ng01-113M04
ChromosomeY (Build37)
Map Location 573,321 - 573,537
singlet/doubletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113M04.bB6Ng01-113M04.g
ACCDH919472DH919473
length4571,227
definitionDH919472|Mus musculus domesticus DNA, BAC clone: B6Ng01-113M04, 5' end.DH919473|Mus musculus domesticus DNA, BAC clone: B6Ng01-113M04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
taagtcgagttacagagacaaagtttggagctgagacgaaaggatggacc
atccagagactgccccacctggggatccatcccataatcagtcaccaaaa
gcagacactattgcatatgccagaaagattttgctgaagggaccctgtta
tagctgtcttgtatgaagctatgccagtgcctggcaaatacagaagtgga
tgctcatagttatctataagatggaacacagggtccccaatgtaggaact
agagaaagcacccaaggagctgaaggagtctgcaaccttataggtgtaac
aacaatatgaactaaccagtacccctggagctcgtgtctctagctgcata
tgtagcagaagatggcctagtcggccatcattgggaagagaggccccttg
gtcttgcaaactttatatgcctcagtacaggggaacaccagggccaagaa
gtgggag
gaattcaaagacccagaagtaaacccacacacctatggacacttgatctt
tgacaaagaagccaaaaacatacaatggaaaaaagaaaacatcttcaata
aatggtgctggtctaactggtggtctgtatggaggaaaatgaaaatagat
ccatatttatcaccttgcacaaagctcaagtccaagtgaatcaaggagct
caacataaaaccagatacactgaatctaatagaagagaaactgggaaata
accttaaacacattaacacagggggaaatttcctgaacattgatggctaa
ggttctaagatcaacaattgataaatgggacctcatgaagctgaaaagat
tctgtaaggcaaaagacaccatcaatagcacaaattggcaacttacagat
tgggaaaaaaaacttcactaaccctacatctaacagaaggctaatatcca
aaatatatattaaaaaaactcaaataaacccaataaaaccacaagtaacc
caattaaaaaatggggtacagaactaatcacaacagaagaatctcaagtg
accaagaagcacttaaagaactgttcaaagtccttagtcatcagagaatg
gccctgagatttcacctcatacaaatcagaatggctaagatcaaaatctc
aggtgatagcagatgctggcaaggatgtgaagaaagagaaacactcctcc
attgctggtgggtttgcaagctggtacaaccactctggaaatcaatttgg
aggttcctcagaaaattggaaatagttctacctaaagacccagctatacc
attcctgggcatatacccagaagatgctccaacatataataagaatacat
gctccactatgttcatagcaatcttgtttgtaatagtcagaagctggaaa
caatccagatgtccctcaacataaaaatggatgcggaaaatgtggttcat
ttacatagtgaatactattcggctattaaaaatgagacatcatgaatttt
gcaggcaaatggatggaactagaaaaatatcatctgagtgaggtactcaa
actcacaaggacatgcatggtatgtactcactgataggtggatatagtca
aaaggtactgatttctaggatcttaccccagaaccgtagaggttaacagc
gaaggccaatgagattcattccttgaatggtaagatcatatcatgggtag
acagaagtggagaggggaacacaggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573321_573537
seq2: B6Ng01-113M04.b_292_509

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCT  50
      ||| |||| |||||||||| |||||||||||| ||||  ||||||| | |
seq2  ATGTAGGAACTAGAGAAAGCACCCAAGGAGCTGAAGGAGTCTGCAACCTT  50

seq1  ATAGATGGAACAACAATATGAA-TAACCAGTATCCACAGAGCTCATGTCT  99
      |||| || |||||||||||||| ||||||||| ||   |||||| |||||
seq2  ATAGGTGTAACAACAATATGAACTAACCAGTACCCCTGGAGCTCGTGTCT  100

seq1  CTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATTGGGAAGA  149
      ||||||||||||||| |||||||||||||||| |||||||||||||||||
seq2  CTAGCTGCATATGTAGCAGAAGATGGCCTAGTCGGCCATCATTGGGAAGA  150

seq1  GAGGCCCCTTGGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAACACC  199
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAGGCCCCTTGGTCTTGCAAACTTTATATGCCTCAGTACAGGGGAACACC  200

seq1  AGGGCCAAGAAGTGGGAG  217
      ||||||||||||||||||
seq2  AGGGCCAAGAAGTGGGAG  218