BAC Information

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BAC

Clone NameB6Ng01-114H09
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,578
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114H09.bB6Ng01-114H09.g
ACCDH919975DH919976
length3981,222
definitionDH919975|Mus musculus domesticus DNA, BAC clone: B6Ng01-114H09, 5' end.DH919976|Mus musculus domesticus DNA, BAC clone: B6Ng01-114H09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
atcccataatcagcctccaaacgctgacaccattgaatacactagcaagt
gtttgctgaaaggaccctgatatagctgtctcttgtgagattaggccagg
gcctggcaaacacataagtggatggatcagctattggatggatcacaggg
cccctaatgaaggagctagagaaagtacccaaggagctaaagggatctgc
aaccctataggtggaataacattatgaactaaccagtatcccggagctct
tgactctagctgcatatgtatcagaagatagcctagtcggccatcagtgg
aaagagaggcccattcgacttgcaaacgttatatgccccagtacagggga
acgccagggccaaaaagtgggaatgggtgggtaggcaggtgggggggg
gaattcatcatctgattcagagctaccaagagctggctccccgagcccat
ccagcgatgagcacaggctccttctcctagagacctccgctaattgatct
ttcttcttttcccttttccctcttttccttctaatctctctccaggtatt
cctacctgaccttaacttttcctcgggttcaagacccttggaaaggcctg
tatacttagtttgtgtaccatattttctctttgctcctactctctctccc
cgctttacttctgatagattgactttaatttcgtctagaattcgccctgc
cttaaccacttgttgacatgtgaaaaggaacaaaagggcttctaacacta
gacaaagttcaaggccaaacataccttgtaaagctatttcccactttact
tctgatagactgtcttgactttccttagaaagttcaagaccagacttacc
ttgtaaagctgtactcactggtactcctgttccccagctgaagagttctg
aattcatgcagttgaatccttctcaacagtctgtgatgcgggaacacttt
attaccgccattccccagctgaagagttctgaattcacgcagttgaatcc
ttctcaacagtctgttttacgggaaccttcattaccataacccgcagttc
tggttccggaatgagggatcttccttgcgccggtgatggttaactcccgt
ctcgagttttcttgtattttctcgtcccgggtttcagcaccaactcttaa
acgcattctcacgaccggccaggaaagacgcaacaaaccggaatcttctg
cggcaaaagctttattgcttacatcttcaggagcaagagcaagagagcaa
gagacgaagagagagagtgccagaaccccgtcccttttaaggagattatc
ctccacctaggacgtgttactccctgattggctgcagcccatcggcccag
tgtcatcacgggaaaggcagaacacatggcgggaaactgccctgcacgtg
tgcagattatgtttacacttagaacacagctgtcaggcatctataatggc
aaatggggagggcgcctcctcacattcagccaaagaacatcactaaatat
tcttgtagttatatcaggatccattattatagtagctaataactaggacc
tagggttctctcgaatctaatttcacttgaatgttatcgttcaggtattc
acggttcctcaggtgcttcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870578
seq2: B6Ng01-114H09.b_214_446

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      | |||||||||||||||||| || ||| |||||||||||||| |||||||
seq2  ATAACATTATGAACTAACCAGTATCCCGGAGCTCTTGACTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | |||||| ||||| |||||||||||||||| ||||||||||||||||||
seq2  ATGTATCAGAAGATAGCCTAGTCGGCCATCAGTGGAAAGAGAGGCCCATT  150

seq1  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200
       ||| ||||||| |||||||||||||||||||||||||||||||||||||
seq2  CGACTTGCAAACGTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200

seq1  AGGGGCAGTGGGTGGGTAGGGGAGTGGGGGTGG  233
      || || | ||||||||||||   ||||||| ||
seq2  AGTGGGAATGGGTGGGTAGGCAGGTGGGGGGGG  233