BAC Information

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BAC

Clone NameB6Ng01-114N09
ChromosomeY (Build37)
Map Location 1,120,866 - 1,120,951
singlet/doubletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114N09.bB6Ng01-114N09.g
ACCDH920256DH920257
length1,263568
definitionDH920256|Mus musculus domesticus DNA, BAC clone: B6Ng01-114N09, 5' end.DH920257|Mus musculus domesticus DNA, BAC clone: B6Ng01-114N09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagactttcaaagaagaggaaatactaatactactcaaact
attccacaaaatagaaacagaaggaacattgtcaaactcattttatgagg
ccacagttaccttgacacctaaaccacccaaagactcaacaaagaaagaa
aattcagacctattgcccctatgaacattaatgcttaactactcaataaa
atactcaaaaacagaatccaggtatgcatcaaatacatctgtcaagataa
agtagtcttcatccaggggatgcagggatagttcaatatatgaaaatcca
tccacgtaatccaccatataaacaaagtgaaaggaaaaaaatacatgatt
atctcattagatgctgaaaaggcctttgataacattcagcatccctttat
gttaaaggtattagagaaatcaggatacagggtacatacctaaacataat
caaagcaatatacagcaaaccaatagccaacattaaattaaatggagaga
catgtaaagcaatttcactaaaaccagggacaagacaaggttgcccactc
tccctaactattcaatatagtgcttgaagttctagccagagcagtaagac
aattaaagaagatcaaggggatacaaattagaaagaagtcaaagtgttgc
tccaaaatatttgaggataacatgatactaaacataagcaaccccaaaat
ttctaccagagaactaatactgatgataaacaacttccaaaaagtgtctg
gatataaaattaacataaacaaatcagtagttttactttatacaaataat
aagtgggctgagaaataaattactgaaacaacacctttcacaatagacat
gaataatataaaatagcctgctgtaactctaacccagcaagcaaaagatc
tatatgacaagaacttcaagtcactgaagaaagaagttgaagacctcaga
agagggaaagatctcccatgtcatggataggtagaatttgcacagtgcaa
atggccaacttcccaaagatatctacagattcatgcatcccatcaaaatt
caacacattcttcacagacgtggaagagcattgtcattttcatatgaaag
caaaacctaggatagcacaaacaatctgataataagaatttctgagaata
actatctggactcaagctacgataagcatatggtaaaaatgcctaggatg
atgccgaacggataacctgaggatggttccaattcaaggacctggagaat
aaatctcactgtg
gaattcttgggggtggggtactggttagttcatattgttgttgcagaccc
cttcagctccttgggtactttctctagctcctccattgggggccctgtgt
tccatccaatagctgactgtgagcatccacttctttatttgccaggcact
ggcctagcctcacaaaagacttctatatcagggtcctttcagcaaaatct
tgctggcatatgcaatagtatctgcatttggtggctaattatgaggtgga
tccccagttggggcagtctctggatggtccatcctttcatcttagctcca
aactttgtctctgtaactccttccatgggtatttggtattttgttcccta
ttctaaggaggaatgaagtatccacgtgtctgtataagtaggcaatcata
agtataaacttctttcttaaaacctctttgctgtattccaaatatatata
tatttgttatatatatatatatatatacatgttacttcatctttttttgg
ttctaggattttgtgcaggtttgaatgaaaatgacctccataggctcata
tttttgaatgcctggtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120866_1120951
seq2: B6Ng01-114N09.g_118_203

seq1  CCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCTAT  50
      ||||| |||||||||| ||||||||||||||||||||||||| ||||| |
seq2  CCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGT  50

seq1  GATCCATCCATTAGCTGACTGTGAGCATCCACTTCT  86
      | |||||||| |||||||||||||||||||||||||
seq2  GTTCCATCCAATAGCTGACTGTGAGCATCCACTTCT  86