BAC Information

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BAC

Clone NameB6Ng01-116F06
ChromosomeY (Build37)
Map Location 1,544,733 - 1,544,796
singlet/doubletsinglet
Overlap genenone
Upstream geneUty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
Downstream geneLOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116F06.bB6Ng01-116F06.g
ACCDH921353DH921354
length158943
definitionDH921353|Mus musculus domesticus DNA, BAC clone: B6Ng01-116F06, 5' end.DH921354|Mus musculus domesticus DNA, BAC clone: B6Ng01-116F06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatagccattatgcttcaagatcttcatgccaagatccatgtcag
aaacttgtatctcccagccttcagattaggattactgttgagactccaat
tctggattgtagttcattccagatatagtcaagttgacaatcaggaatag
ccactaca
gaattctttgtttagctctgtaccccatttttaatagggttatttggttc
tctggagtctaacttcttgagttctttgtatatattggatattagccctc
tatagggtgtaggattggttaagatcttttcccaatctgttggttgccat
tttgtcctattgacagtgtccttggccttagagaagctttttcattttat
gaagtctcacttgtcagttcttgatctcagagcataagttattggtattc
tgttcaggaaattctcccctgtacccatgagttccagaatcttccccact
ttcttttctattagtttcagtgtatcaggttttacatggaggtccttgat
ccacttagatttgggctttgtacaaggagataagaatggattaatttgca
ttcttatgcatgctaacgtccagttgaaccagcaccatttgttgaaaatg
ctgtcttttattcactggatgactttagttcttttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgggccttcaattctaatccattgat
ttacctgtctgtcattgtactaataccatgcagttcttatcactattgtt
ttgtagtatagcttgaggtccaggatgctgactctcctcgaagttctttt
attgttgagaagagtttttgctatcctgtttttttggttttttgtttgtt
tgtttgtttgtttttgtttttgtttttgttttgttttttttttgcttttg
ttttgttattcgggatggatttgaaaactgctctttctactctatgaaga
aattatggtgagattttgatggggaccacattgaacctgcatatttcttt
cagcaagatgggccatttttactatattcgccattcatgagcataggaga
tctttccatcttctgaggcttctcaatttctttcttagagact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1544733_1544796
seq2: B6Ng01-116F06.b_143_206

seq1  TCCAATTCCGGATTGTAGTTCATTCCAAATATTGTCAAGTTGACAACCAG  50
      |||||||| |||||||||||||||||| |||| ||||||||||||| |||
seq2  TCCAATTCTGGATTGTAGTTCATTCCAGATATAGTCAAGTTGACAATCAG  50

seq1  GAATAGCCACTACA  64
      ||||||||||||||
seq2  GAATAGCCACTACA  64