BAC Information

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BAC

Clone NameB6Ng01-120N18
Chromosome16 (Build37)Y (Build37)
Map Location 83,149,076 - 83,150,1321,120,588 - 1,120,672
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG665260
Downstream geneEG545172, LOC100039572
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120N18.bB6Ng01-120N18.g
ACCDH924692DH924693
length1,117859
definitionDH924692|Mus musculus domesticus DNA, BAC clone: B6Ng01-120N18, 5' end.DH924693|Mus musculus domesticus DNA, BAC clone: B6Ng01-120N18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(83,149,076 - 83,150,132)(1,120,588 - 1,120,672)
sequence
gaattctttgctaacaacagtcatgcattggtctgccttgcactgagtat
ttgagctacatttgttgggattccgaaaactcaggctgattggatccacg
tgctgaggcaagactagctagagtgacagaaacagaccttagcttgctgg
tatagctagctagctgtacaatgcttgtgggtctcctttctgcactgatc
tttgcttccctaagactggcacagctaagaacttctcctggtatgcctgt
tggtccctcctgctgactcaagccattgtggaggcctggctgtctctgct
tggtcatgtcacagctgttgctaaggaactctaccaaactggactgctca
tgtatccgtgaagtgtttgagagtggatggagttgcagctacctgttaac
ctgtgaattgagctgctgatttccagacaacataaatgggagttgtttca
aagacatttctaaacatttccactctccctgaatcctttttctccactac
ctctggtgggtggtgggttataaacatttgagaaccatcattaaatataa
agtttgaaaaatctaaaagttatagtaaagcaaatttcatgcaaaatgaa
tattgttagaaacatagaaaatatacattaaagtaaaagttgacttagaa
atctagaatcattatgcaaatgggatgaaaatacaaacccttcattttat
tcagggacttggaattttagatgctattgcatcagcaccattatcctgta
cattaaatatttatggtaaaattttcagcctttataattacttgaaaagg
attctttctttatatatcaaatattttctttcataagtaacatttcaaaa
gcattcttcataatcattatagatactaattttaatccatgttattttgt
tgttgtaaaataaatgatgttctttttccctccactgaaacacaaatata
tttatgttaacatttatcagtagtaatgttctgattaaaagtaatttgaa
ctcgcacatatgtactcactgatagttgaatataggccagtaaacttaga
tacccaggataatgatacatttgctaaccatgaactcaagaagaacgaag
accaaagtgtgacactt
gaattctgtactaaaaccatctggtactgggcttttttttggttgggaga
ctttaatgactgcatctattcccttgggggttagggggctgtgctgatcc
tgatttaattttggtacctggtatctgcctagaaaatcatccatttctag
atttttttccattttttattaggtatttagctcatttacatttccaatgc
tataccaaaagtcccccatacccacccacccccactttttgtacaaggat
ctaattattttttaaacttttgcagttcctgctgttatatctctcctttc
attcctgactttgttaatttgggtaccgtctctgttgtttctggttagtt
tggctaagggtttgtctaccttgttgattttcttcaagaatcagctgctg
gttttgttgattctttgtattgttcttttttttttttttctacttggttg
acttcagtcctgagtttatttcctgccttctagtacttttgcctgttttt
gcttctttttgatctagagcattcaggtgtactgtttagctgctagtgta
tgatcttttcaatttctttatgcaggcactcggagctttgagtttacctc
ttagcactgctttcattgtgtcccataagtctgggtatgctgtgccatca
ttttcattgaattctaaaagtctttaatttctttctttacttcttccctg
accaagttatcattgagtagatagttgttcagcttcaatgtgtgtggtgg
gctttctgttgctattgaagtcacagtcttagtccatggtggactgatag
aatacatggattaattcaatcccacactgttgctgtggtcagaggcactt
gtggaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_83149076_83150132
seq2: B6Ng01-120N18.b_117_1164

seq1  ATTCCGAAAACTCAGGCTGATTGGATCCACGTGCTGAGGCAAGACTAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCGAAAACTCAGGCTGATTGGATCCACGTGCTGAGGCAAGACTAGCT  50

seq1  AGAGTGACAGAAACAGACCTTAGCTTGCTGGTATAGCTAGCTAGCTGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGACAGAAACAGACCTTAGCTTGCTGGTATAGCTAGCTAGCTGTAC  100

seq1  AATGCTTGTGGGTCTCCTTTCTGCACTGATCTTTGCTTCCCTAAGACTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTGTGGGTCTCCTTTCTGCACTGATCTTTGCTTCCCTAAGACTGG  150

seq1  CACAGCTAAGAACTTCTCCTGGTATGCCTGTTGGTCCCTCCTGCTGACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTAAGAACTTCTCCTGGTATGCCTGTTGGTCCCTCCTGCTGACTC  200

seq1  AAGCCATTGTGGAGGCCTGGCTGTCTCTGCTTGGTCATGTCACAGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATTGTGGAGGCCTGGCTGTCTCTGCTTGGTCATGTCACAGCTGTT  250

seq1  GCTAAGGAACTCTACCAAACTGGACTGCTCATGTATCCGTGAAGTGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGGAACTCTACCAAACTGGACTGCTCATGTATCCGTGAAGTGTTTG  300

seq1  AGAGTGGATGGAGTTGCAGCTACCTGTTAACCTGTGAATTGAGCTGCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGATGGAGTTGCAGCTACCTGTTAACCTGTGAATTGAGCTGCTGA  350

seq1  TTTCCAGACAACATAAATGGGAGTTGTTTCAAAGACATTTCTAAACATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGACAACATAAATGGGAGTTGTTTCAAAGACATTTCTAAACATTT  400

seq1  CCACTCTCCCTGAATCCTTTTTCTCCACTACCTCTGGTGGGTGGTGGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCTCCCTGAATCCTTTTTCTCCACTACCTCTGGTGGGTGGTGGGTT  450

seq1  ATAAACATTTGAGAACCATCATTAAATATAAAGTTTGAAAAATCTAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACATTTGAGAACCATCATTAAATATAAAGTTTGAAAAATCTAAAAG  500

seq1  TTATAGTAAAGCAAATTTCATGCAAAATGAATATTGTTAGAAACATAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTAAAGCAAATTTCATGCAAAATGAATATTGTTAGAAACATAGAA  550

seq1  AATATACATTAAAGTAAAAGTTGACTTAGAAATCTAGAATCATTATGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACATTAAAGTAAAAGTTGACTTAGAAATCTAGAATCATTATGCAA  600

seq1  ATGGGATGAAAATACAAACCCTTCATTTTATTCAGGGACTTGGAATTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATGAAAATACAAACCCTTCATTTTATTCAGGGACTTGGAATTTTA  650

seq1  GATGCTATTGCATCAGCACCATTATCCTGTACATTAAATATTTATGGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTATTGCATCAGCACCATTATCCTGTACATTAAATATTTATGGTAA  700

seq1  AATTTTCAGCCTTTATAATTACTTGAAAAGGATTCTTTCTTTATATATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCAGCCTTTATAATTACTTGAAAAGGATTCTTTCTTTATATATCA  750

seq1  AATATTTTCTTTCATAAGTAACATTTCAAAAGCATTCTTCATAATCATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTCTTTCATAAGTAACATTTCAAAAGCATTCTTCATAATCATTA  800

seq1  TAGATACTAATTTTAATCCATGTTATTTTGTTGTTGTAAAATTAAATGAT  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TAGATACTAATTTTAATCCATGTTATTTTGTTGTTGTAAAA-TAAATGAT  849

seq1  GTTCTTTTTCCCTCCACTGAAACACAAATATATTTATGTTAACATTTATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTTTCCCTCCACTGAAACACAAATATATTTATGTTAACATTTATC  899

seq1  AGTAGTAATGTTCTGATTAAAAGTAATTTGAACTCGCACAATATGTACTC  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGTAGTAATGTTCTGATTAAAAGTAATTTGAACTCGCAC-ATATGTACTC  948

seq1  ACTGATAAGTGAATATTAGCCCAG-AAACTTAGAATACCCAAGATATATG  999
      |||||||  |||||| ||| |||| |||||||| ||||||| |||| |||
seq2  ACTGATAGTTGAATA-TAGGCCAGTAAACTTAG-ATACCCAGGATA-ATG  995

seq1  ATACAATTTGCTAAACACATGAAACTCAAGAAGAACGAAGACCAAAGTGT  1049
      |||| |||||||||   |||| ||||||||||||||||||||||||||||
seq2  ATAC-ATTTGCTAA--CCATG-AACTCAAGAAGAACGAAGACCAAAGTGT  1041

seq1  GGACACTT  1057
       |||||||
seq2  -GACACTT  1048

seq1: chrY_1120588_1120672
seq2: B6Ng01-120N18.g_219_303

seq1  TTTTTTTCCATTTTTTATTAGGTATTTAACTCATTTACATTTCCAATGCT  50
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTTTTCCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCT  50

seq1  ATACCAAAAGTCCCCCATATCCACCCACCCCCACT  85
      ||||||||||||||||||| |||||||||||||||
seq2  ATACCAAAAGTCCCCCATACCCACCCACCCCCACT  85