BAC Information

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BAC

Clone NameB6Ng01-122A02
ChromosomeY (Build37)
Map Location 1,544,828 - 1,544,885
singlet/doubletsinglet
Overlap genenone
Upstream geneUty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
Downstream geneLOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122A02.bB6Ng01-122A02.g
ACCDH925545DH925546
length1,150628
definitionDH925545|Mus musculus domesticus DNA, BAC clone: B6Ng01-122A02, 5' end.DH925546|Mus musculus domesticus DNA, BAC clone: B6Ng01-122A02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
gtatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatggccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctagacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcccaa
tggagagctagagaagtacccaggagctaaagggatctcaccctataagt
ggacacatatgactaccagtacccctgagctctgactctagctgcatatg
tatcaaagatgcctagtcgcatcactgtagagagtccaatgaaacgcgaa
cttgtgttgcccagtcagggaacgccaggccaacgagaaatgagtgttgt

gaattcctggtctttctgtctccatctcccatgtgtttagattatagcca
tgtgccaccacatctgcttttatgttagtgccgggtcaaactcaaagctt
tgtgaaggataaataagtagtcttccaagtgaactacacctctttaatct
ctcttgctggaatatagacaaacctttcttatactcctttaattctaaac
aatgtaggtaaggttagtttgtagaaggaagcagccacaattaaaagtga
tgtctaattgagggatagacaaagtggtcagtcagagaaagatttgacag
aatgagtcaaggataagataggtccaactctcagaacagtacaggaaaga
gaaactatgtaagggcattgcagagagagagagagagagagagagagaga
gagagagagagagagagagagagagagaacagttgagttcagtcagttga
gtgtagttgagttcctgagcagaggaagttgaaggcagagactgtttaga
gggggtgagaagaggcagttttactggaactgttttacaaagataggttg
taggtgaacagaaagagccagagaatgaggggccaaaaagataagaatag
attgtcagagttagttcaagaccaagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1544828_1544885
seq2: B6Ng01-122A02.g_438_495

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  50

seq1  AGAGAGAA  58
      ||||||||
seq2  AGAGAGAA  58