BAC Information

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BAC

Clone NameB6Ng01-122K06
ChromosomeY (Build37)
Map Location 385,600 - 385,758
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y
Downstream geneTspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122K06.bB6Ng01-122K06.g
ACCDH926014DH926015
length9811,057
definitionDH926014|Mus musculus domesticus DNA, BAC clone: B6Ng01-122K06, 5' end.DH926015|Mus musculus domesticus DNA, BAC clone: B6Ng01-122K06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataaaaacaaaagcagaagcagaagccatactttagaaacaaa
gtacctataagtttaaaaaaatgatcttgatacaatattatgagacaaag
agcaatgattctacaaagatgacattgagattttgttagccatctatgta
ctgctggacatggggcttacccttaagagtggtttatttcaagccagtgt
ggtggcgcatgcctttaatcccagcactcgggaggcagaggcaggcagat
ttctgagttcgaggccagtctggtctacaatacaaagtgagttccaggac
atccagggctatacggagaaaccctgtctcaaaaaaccaaaaaaaaaaaa
aaaaaaaaagtggtttatttcctcagtaaaattcctttggagaaaaacaa
gctttcatttgcaagtggttatcaactggagattgctgatgtgttaaggg
gcaagtgtccatttttctttttagttctaggaccccatctgatgcccctt
gtcattcattcatcttcagtctctgtgggttcatatcgctcatgtgcact
attattgttctgtctagaagtccttgattccatcattcctctggctctta
cacttttgccatcgcctcttctgctgtgttcttcgagtcctgcagtgagg
catttgatagacacatgacattttaggctgagtgttccaaggcttctaac
tctctgtacatcatctgtgtgtggctctctgtttttattcccctatgctg
aaggaagaagcttctctgataatggctaagcaaccagttacccacggata
gagcagattgtcattttcttgctatagtcattttattgaaatgttctttt
agcaaaatgtatttggttcccactagttccctggcctatatagttttagt
tcatggcatataagcagtgttaaggatggttctatctcatgggatgggcc
ttaaatcaaatcacatttgtttggtgactcc
gaattcttcttcatagagacatccagttagaccagcatcatttgttaaag
atgctctcctttttcattgtatggttttgtcttatttgccaaaaaaaaaa
agtgtacacatgtatgtggggttatttctgggtctttgattaaattccat
tgatcaacctatctgtttctatatcaggagtatccagttttattactatt
gttctgtagtacagcttgaagtcagatattgttattcttttattattcat
gactgttttcgatatcttgtgttttttgtttgtttttccatatgaagttg
agaattgctctgtcaaggtcttcaaaaatacgtgttagaattttgatgag
gattgcattgaatctgtagattgcttttggtaagattgccattttcacta
tgttaatcctaaagatccatgagcatgggagatcttgccatcatctgata
ttttctttagtttctttcttaaggggagtgaaattcttcttatatagacc
tttcacttgcttgtttaaagttacaccaagatattttatattattagtgg
ctattgtgaagtaggttgttccataatttctttctctacccatttttcat
tcctataaaggaagactactcatttctttgagttaattttatttctactt
attttgctgaggttatcagctgtaagtgttctctggtagaattttgagga
ccacttatgtatactatcacatcatccacaaatagtgataccttgaattc
ttcctttccaatttgtatccttatcatcttctttattgacttatcgcttt
agctagaacttcaagtactatattgaaagacatgggagagagtggcattc
ttgtcttctccctgattttagtgggattaacttaagtttctctcaatgga
tttgatgttggctattggcttgatgtatattgcttttattaggttatgta
tgttgaatttctgacccgaaacatttttaaaataagattgttagattttt
gtcaagctttttcagcattatttgagatgaacatgtgttttcattgtcct
aattctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_385600_385758
seq2: B6Ng01-122K06.b_238_399 (reverse)

seq1  TTTTTTTTTTTTTTTTTTTTGGTTTTTTGAGACAGGTTTTCTCTATATAT  50
      |||||||||||||||||||||||||||||||||||| ||||||    |||
seq2  TTTTTTTTTTTTTTTTTTTTGGTTTTTTGAGACAGGGTTTCTC--CGTAT  48

seq1  AGCCCTGGCTGTCCTGGAACTCACT-----CTGTAGACCAGGCTGGCCTC  95
      |||||||| ||||||||||||||||      |||||||||| ||||||||
seq2  AGCCCTGGATGTCCTGGAACTCACTTTGTATTGTAGACCAGACTGGCCTC  98

seq1  GAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGC  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGC  148

seq1  TTGCGCCACCACAC  159
       |||||||||||||
seq2  ATGCGCCACCACAC  162