BAC Information

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BAC

Clone NameB6Ng01-124H21
ChromosomeY (Build37)
Map Location 629,033 - 629,636
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246
Downstream geneUsp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124H21.bB6Ng01-124H21.g
ACCDH927386DH927387
length6511,151
definitionDH927386|Mus musculus domesticus DNA, BAC clone: B6Ng01-124H21, 5' end.DH927387|Mus musculus domesticus DNA, BAC clone: B6Ng01-124H21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcatgggtagtgcaaccagttagagagtatataaaatattata
cataaaaaactttcacatcctttggatgtttgcagttgatcataactttg
tggttacctttccacagcataaattttaaaaacatcacacacagagagag
agacccatatatataaatggcattcatgagtaaatcatatactttgacca
catctagccctctctccaggattcccttttctttctccacagttctactt
ctcctttcatgtcacctctccctgccatcccgtgtgtgtgtgtgtgtgtg
tgtgtgtgtctttgtgtgcttgtgtgtctatgtgtctgtgtgtgtatatg
tgtctcagtgtgtgtgtgtctcagtgtgtgtgtgtctgtgtgtctttgtg
tgtttgtgtgtctatgtgtgaatatgtgtctcagtttctgtgtgtctgtg
tgtgtgtgatatatgtttctatataaactctataatctacaaatgaaaga
aaacataatactaatcttttttagtctgccttatttttcttaatgtgata
atttacaatgatatccattttcctatgaaacaaaataattttattctttt
atggctgaataaaactgtattatgtggaatgaatatcatattttatctat
t
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaagaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctgtcgtggatgttgagaaagaggaacactcctccattgttcgtg
ggattgcagggttgtacaaccactctggaaatcagtctggtggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggaggtacagagacaaagtttggagctgagataa
aaagatggaccatgtagagactgccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatactagcaagattatgctgaaagg
actctgatatagctgtctcttgtcagagtatgcctgggcctagcaaacat
agagtggatgctcacagttggctattggatggatcacatggccccatgag
aggctaggaggaagtacccagagcttaaggatctgcaccctataagtgga
acaactattgaactaccagtaccctgagctccttgacctagctgcatggt
atcaagatgcctagtcgccctactgcagagaggcatttgaactccaacct
atattctcagagttcaggacgtcagccataggaattggctgggatggaag
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_629033_629636
seq2: B6Ng01-124H21.b_46_651 (reverse)

seq1  AGCCAT-AAAGAATAAAATTATTTTG-TTCATAGGAAAATGGATATCATT  48
      |||||| ||||||||||||||||||| |||||||||||||||||||||||
seq2  AGCCATAAAAGAATAAAATTATTTTGTTTCATAGGAAAATGGATATCATT  50

seq1  GTAAATTATCACATTAAGAAAAATAAGGCAGACTAAAAAAGATTAGTATT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTATCACATTAAGAAAAATAAGGCAGACTAAAAAAGATTAGTATT  100

seq1  ATGTTTTCTTTCATTTGTAGATTATAGAGTTTATATAGAAACATATATCA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCTTTCATTTGTAGATTATAGAGTTTATATAGAAACATATATCA  150

seq1  CACACACACAGACACACAGAAACTGAGACACATATTCACACATAGACACA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACAGACACACAGAAACTGAGACACATATTCACACATAGACACA  200

seq1  CAAACACACAAAGACACACAGACACACACACACTGAGACACACACACACT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACACAAAGACACACAGACACACACACACTGAGACACACACACACT  250

seq1  GAGACACATATACACACACAGACACATAGACACACAAGCACACAAAGACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACATATACACACACAGACACATAGACACACAAGCACACAAAGACA  300

seq1  CACACACACACACACACACACACACGGGATGGCAGGGAGAGGTGACATGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACGGGATGGCAGGGAGAGGTGACATGA  350

seq1  AAGGAGAAGTAGAACTGTGGAGAAAGAAAAGGGAATCCTGGAGAGAGGGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAAGTAGAACTGTGGAGAAAGAAAAGGGAATCCTGGAGAGAGGGC  400

seq1  TAGATGTGGTCAAAGTATATGATTTACTCATGAATGCCATTTATATATAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTGGTCAAAGTATATGATTTACTCATGAATGCCATTTATATATAT  450

seq1  GGGTCTCTCTCTCTGTGTGTGATGTTTTTAAAATTTATGCTGTGGAAAGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTCTCTCTCTGTGTGTGATGTTTTTAAAATTTATGCTGTGGAAAGG  500

seq1  TAACCACAAAGTTATGATCAACTGCAAACATCCAAAGGATGTGAAAGTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCACAAAGTTATGATCAACTGCAAACATCCAAAGGATGTGAAAGTTT  550

seq1  TTTATGTATAATATTTTATATACTCTCTAACTGGTTGCACTACCCATGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTATAATATTTTATATACTCTCTAACTGGTTGCACTACCCATGAA  600

seq1  GAATTC  604
      ||||||
seq2  GAATTC  606