BAC Information

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BAC

Clone NameB6Ng01-125B23
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,569
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125B23.b
ACCDH927849
length449
definitionDH927849|Mus musculus domesticus DNA, BAC clone: B6Ng01-125B23, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttcttagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttagcaaacacagaagtggatgctcacagtcagctaatggatg
gatcacagggctcccaatggaggagctagagaaagtacccaaggagctaa
agggatctgcaaccctataggcagaacaacataatgaactaaccagtacc
ccagagctcttgactctagctgcatatgtatcaaaagatggcctagtcgg
ccatcactggaaagagaggcccattggacacgcaaactttatatacccca
gtacagggtaacgccagggccaaaaagggggagtgggtgggtaggggag
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870569
seq2: B6Ng01-125B23.b_267_490

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||  ||
seq2  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGCAGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      ||||||| |||||||||||| |||||| |||||||||||||| |||||||
seq2  ACAACATAATGAACTAACCAGTACCCCAGAGCTCTTGACTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150

seq1  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200
      ||||| ||||||||||||| ||||||||||||| ||||||||||||||||
seq2  GGACACGCAAACTTTATATACCCCAGTACAGGGTAACGCCAGGGCCAAAA  200

seq1  AGGGGCAGTGGGTGGGTAGGGGAG  224
      ||||| ||||||||||||||||||
seq2  AGGGGGAGTGGGTGGGTAGGGGAG  224