BAC Information

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BAC

Clone NameB6Ng01-129A14
ChromosomeY (Build37)
Map Location 1,870,463 - 1,870,572
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129A14.bB6Ng01-129A14.g
ACCDH930728DH930729
length1,260436
definitionDH930728|Mus musculus domesticus DNA, BAC clone: B6Ng01-129A14, 5' end.DH930729|Mus musculus domesticus DNA, BAC clone: B6Ng01-129A14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatttcatgacaaaggactcatgcccatggaattcacaggtctga
cccagtagaactaacccaccagaatggtagaatgggctcttaaagtctca
gactcagctagattttaatatcttccagggctggagtaagaatctctaga
ctatgtcctagacaagtagccaaggcacactgcagtgtctctgatagcca
ggactcatacagagatcaaccatgatttccaactactctcagaaactaaa
gagcaaaatagtgtttcctattcctatttacagtctgctagaccaaactc
tccatcccagagggagagacagttcctacaggaggcacatcaacaatccc
actgctctgggttatggctgttgccactttgacctcctcattgctctgaa
tcaacaggtcaagaaggcaattatgacatcactgtggtatccaacctgac
taggaccccacagtgaatttctgtctggaatacaggcaacacctgatggg
accatctatgatcaccattcaccgtgagaccattggaaaactgtgatcta
atgcaagtaggcctacgagtgtcccagactctcagaaatggagatttggt
catcctgaccaggtaacgaaccctatctagatcaggcacttctaaaggca
aagggaatacagggtgcacagtatgagatcgctgtaaatgccagctaatt
accatgtaacaagctacaaacaccagggctataattgtcacgtgtatttc
ctcattttattctgaatatgtttctgtatatagattcagaacaaataatc
tttgttttcttttttctttttctcatcttccctcgctgtgtggcttcttc
agacactttgacctcatttaaattttggaatattgcttgtttagaatcag
agtgtttatattcttggtcctccggaaagagtcaatgtgattctaagact
cccctttctttcctgggaaatggattagtgtagttttggttagacgagta
gtttatatggtgtagacgacatgtgtctgttattgtctttatgtgggctt
gtgtatgtgtagtaaataaacatggtgccacatggacagggatgaattta
cagtgttaattctaatgtaacgacgggtggaggatgccaagctttgtaac
agaacgtcattccaggagtgtctgcactgtcctgggggatagacctctct
tgtgcgatgatccatttatcttaagcaagaccacaaattgacgcagagag
aacactctgt
cagacaggagcctggaggcaggagctgatgtggagcccaccaaagagtga
tgcttactgacatgtttcttaagcattgctcatcccgagttcgttagaac
cttagaccaccaacctagggcagcacctgctgaatccttccacatcgatc
accaatcaagaaaatgcatcacaggatttcccataggccaatttcgtggc
tattttatcaattgaggttccttcttctaaaaggacttgtgtataaaatt
gacataaaactcctagcacacaattctttaccaaaagagcaatgctggca
ttttttctatttaagatttcaagctgctagtcggccatcactgcaaagag
aggcccattggacttgcaaactttctatgccccagtacaggggaacgcca
gggccaaaaaggaggagtgggtgggtaggggagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870463_1870572
seq2: B6Ng01-129A14.g_401_510

seq1  CTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACATGCAAACTTTAT  50
      ||||||||||||||||| ||||||||||||||||||| |||||||||| |
seq2  CTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAAACTTTCT  50

seq1  ATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGCAGTGGGTGGGT  100
      |||||||||||||||||||||||||||||||||||| | |||||||||||
seq2  ATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGAGGAGTGGGTGGGT  100

seq1  AGGGGAGTGG  110
      ||||||||||
seq2  AGGGGAGTGG  110