BAC Information

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BAC

Clone NameB6Ng01-129B07
ChromosomeY (Build37)15 (Build37)
Map Location 1,120,598 - 1,120,87667,228,247 - 67,228,858
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278
Downstream geneEG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129B07.bB6Ng01-129B07.g
ACCDH930762DH930763
length1,002810
definitionDH930762|Mus musculus domesticus DNA, BAC clone: B6Ng01-129B07, 5' end.DH930763|Mus musculus domesticus DNA, BAC clone: B6Ng01-129B07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(1,120,598 - 1,120,876)(67,228,247 - 67,228,858)
sequence
gaattcctcatttgactcaagtaactttagggagaaagttttaagagatg
gttatagggtttttttttttgtttttttttttttttggccagaaagatat
agtgaaggtaaaataaagaataatatgtgcccactcttcatagaatagta
agtaaagcctacataattaggaatacaatgaggtttcacaattacactac
gaagagaaataggcttgggacaattttttttaattaggtacttagctcat
ttacatttccaatgctataccaaaagtcccccataccccccccactcacc
tacccacccactccccctttttggccctggcattcccctgtactggggca
tataaaatttgcaagttcaatgggcctctctttgcagtgatggccgacta
ggccatcttttgatacatatgcagctagagacaagagctccagggtactg
cttagttcatattgttgttccacctatagggttgcagttccctttagttc
cttgggtgctttctctcgttcctccattgggggccttgtggtccattcaa
tagctgactgtgagcatccacttctgtgttttcgccctggcatagtctca
caagagagagctatatctgggtcctttcagcaaaatcttgctagtatatg
caatagtgtcagcgtttggaagctgatcatgggatggatctctggatatg
gcaatcactagatggtccatcctttcgtcacacttcaaaattttgtctct
ataactccttccatgggtgttttgtttcctattctaagaaggggcaaagt
gtccacactttggtctttgttctcttgagtttaatgtgtttagcaaattg
tatcttatatcttgggtatcctaagtttctgggctaatatccacttatca
gtgagtacatatgtgcgagttcctttgtgattgggtaacctcactcagat
gatgccctccaggtccatccatttggctaggatttcataaatccattctt
tt
gaattcacagtaattgtatgtgccggactaagacctttacaggaacaagc
cactttgcatgctagcataaataagagagacttctgaggcatcacccctt
agatgagaaactatagttaataattactgaaggaaagcgagtcagctttc
ctcagaggtgaggccatcggtagattgcctatggtctagtggattggact
tagtggattataaaacaggcaacaggatgtaaagttgggaggaaacaatg
acaggaggaatggaggaagagttggaaggaagagttgaggatgcatttga
tcaaactacactgtatccgtgcatgaaattatcaagggagaaataaaaat
attgtattaaaatattattgaagcactgttcatatactataaaattcatc
caatttaagtatacagtttaatgtctcttagtatgtttatggagttatgg
ggctgaccatctccagaatctaatttgagaacattcctgtcatctcataa
tgaaactctgtgtccagttagtagcctttccacattcctacatccactta
aagtcctttaatatgcttctcatctccctgtttccccaatctgcttctca
tctccctgtttccccaacattttgtgtgaacaatacaaatcttttgtgtg
tttgtttctttcatggagcatgtttgtaagggttttctgttgttgttgtt
actgaattcaattccctgggccagctgttaaagttttagcacactattgt
atgtgtgtgtgcttgcccatctgtatttatgtgagtatgtattgtgtatt
gtattgtaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1120598_1120876
seq2: B6Ng01-129B07.b_275_548

seq1  TTTTTTATTAGGTATTTAACTCATTTACATTTCCAATGCTATACCAAAAG  50
      ||||| |||||||| ||| |||||||||||||||||||||||||||||||
seq2  TTTTTAATTAGGTACTTAGCTCATTTACATTTCCAATGCTATACCAAAAG  50

seq1  TCCCCCATATCCACCCACCCCCACTCCCCTGCCCACCCACTCCCCCTTTT  100
      |||||||||     || ||||||||| ||| |||||||||||||||||||
seq2  TCCCCCATA-----CCCCCCCCACTCACCTACCCACCCACTCCCCCTTTT  95

seq1  TGGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAAT  150
      ||||||||| ||||||||||||||||||||||||| ||||||||| ||||
seq2  TGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAATTTGCAAGTTCAAT  145

seq1  GGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATG  200
      |||||||||||| ||||||||||||||||||||||||||||||| |||||
seq2  GGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGATACATATG  195

seq1  CAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGCTCATAACGTTGTTCC  250
      ||||||||| |||||||||| |||||||| |||| |||||  ||||||||
seq2  CAGCTAGAGACAAGAGCTCCAGGGTACTGCTTAGTTCATATTGTTGTTCC  245

seq1  ACCTATAGGGTTGGAGATCCCTTTAGCTC  279
      ||||||||||||| || ||||||||| ||
seq2  ACCTATAGGGTTGCAGTTCCCTTTAGTTC  274

seq1: chr15_67228247_67228858
seq2: B6Ng01-129B07.g_265_879

seq1  GGACTTAGTGGATTATAAAACAGGCAACAGGATGTAAAGTTGGGAGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTAGTGGATTATAAAACAGGCAACAGGATGTAAAGTTGGGAGGAAA  50

seq1  CAATGACAGGAGGAATGGAGGAAGAGTTGGAAGGAAGAGTTGAGGATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGACAGGAGGAATGGAGGAAGAGTTGGAAGGAAGAGTTGAGGATGCA  100

seq1  TTTGATCAAACTACACTGTATCCGTGCATGAAATTATCAAGGGAGAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCAAACTACACTGTATCCGTGCATGAAATTATCAAGGGAGAAATA  150

seq1  AAAATATTGTATTAAAATATTATTGAAGCACTGTTCATATACTATAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTGTATTAAAATATTATTGAAGCACTGTTCATATACTATAAAAT  200

seq1  TCATCCAATTTAAGTATACAGTTTAATGTCTCTTAGTATGTTTATGGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCAATTTAAGTATACAGTTTAATGTCTCTTAGTATGTTTATGGAGT  250

seq1  TATGGGGCTGACCATCTCCAGAATCTAATTTGAGAACATTCCTGTCATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGGCTGACCATCTCCAGAATCTAATTTGAGAACATTCCTGTCATCT  300

seq1  CATAATGAAACTCTGTGTCCAGTTAGTAGCCTTTCCACATTCCTACATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATGAAACTCTGTGTCCAGTTAGTAGCCTTTCCACATTCCTACATCC  350

seq1  ACTTAAAGTCCTTTAATATGCTTCTCATCTCCCTGTTTCCCCAATCTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAAGTCCTTTAATATGCTTCTCATCTCCCTGTTTCCCCAATCTGCT  400

seq1  TCTCATCTCCCTGTTTCCCCAACATTTTGTGTGAACAATAC-AATCTTTT  449
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCTCATCTCCCTGTTTCCCCAACATTTTGTGTGAACAATACAAATCTTTT  450

seq1  GTGTGTTTGTTTCTTTCATGGAGCATGTTTGTAAGGGTTTTCTGTTGTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTGTTTCTTTCATGGAGCATGTTTGTAAGGGTTTTCTGTTGTTG  500

seq1  TTGTTACTGAATTCAATTCCCTGGGCCAGCTGTTTAAAGTTTTAGCACAC  549
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTGTTACTGAATTCAATTCCCTGGGCCAGCTG-TTAAAGTTTTAGCACAC  549

seq1  TATTGTATGTGTGTGTGCTTGCCCATCTGTATTTATGTGAGTATGTA-TG  598
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TATTGTATGTGTGTGTGCTTGCCCATCTGTATTTATGTGAGTATGTATTG  599

seq1  TGTA-TGTA-TGTAAG  612
      |||| |||| ||||||
seq2  TGTATTGTATTGTAAG  615