BAC Information

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BAC

Clone NameB6Ng01-129H03
ChromosomeY (Build37)
Map Location 573,321 - 573,553
singlet/doubletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129H03.bB6Ng01-129H03.g
ACCDH931026DH931027
length1,230409
definitionDH931026|Mus musculus domesticus DNA, BAC clone: B6Ng01-129H03, 5' end.DH931027|Mus musculus domesticus DNA, BAC clone: B6Ng01-129H03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataaatagaaacattgaagagaactcaagttgtgaagaaaata
gaactgaaaaactcagtaacccaactagaaaaatcaaggaaaagccttac
aaatagaatggatcaagtagaaaatacaatacggggacttaaagatgagt
acagactcttagacaatattaagaagaatattaactttttaaaaaggaac
atggaagaaatttgggataccatgaatagactaaactttcaaattatagg
aatagatgaagtagaagaatccaaagtcaatggagtaaatcatagaaaaa
aaaaaaatcccaagctcaggaaaaacatactcatacaaatacaagaagca
cacgggaatatcaaatagacaagacaagaaaaaatatccctatgccatat
tatagttaaaatgctaagtatatgtaacaacaaaatttcttgaaaggtgc
aagaaaagaaagaagacacatataaagaaaaatacatcatactaatactt
aacttctcagtgaaactttgatagtcagaacatctgactacaatatacat
tttaagtcataaaaggctatgacccagagtaatatagccaccaaaaattt
ctgccatcattgaaggagacagaaaaacttgctacaccaaaacacacaca
cacacacacacacacacacacacacacacacacacacacacacacgagaa
accacagtcaacactatacttaatagagaaaacatttaagcaaccccatt
gaaataagaaatgtccattatccctattccttttctttttttaattaggt
attatttcatttcgtttccaatgctatcccaaaagtccccctcctgctcc
tcccacgccccccctccgactgccacttcttggccctggcatcccctgta
ttgaggcagataaagtttgcacgaccaatgggcctcttttttcactgatg
gccaactagccatctttctgatactatgcagctagagaccacagctctgg
gggtactggtagtccatattgttgttctaccttataggttgcagattcct
ttagcttctttgggtactttctctagcttcttcaatggggccctgtgatc
atcatagcctgactgtgagcatccattctgtgattgcttggcctgcctag
ttcagagaacgctcatatccaggtcttacgcaccttgctagtatcatggt
cacattgaagctgatttgtgatgaatcccg
atgttgagtcatttctgccatactctattgattagcagttgagtcataag
tctttcagattcgagtggctaattaagctgcatctcctgtcgtgggaagt
gaaaccttgcataacatcatgaggcctgaaagatagtgctatggacaatc
tattggatggaacacagggcccccaatggaggatctacagaaagtaccca
aggagctaaaggggtctgcaaccctataggtggaacaacaatatgaacta
accagtaaccccagagtttgtgtctctagctgcatatgtagcagaagatg
gcctattcagccatcattgggaagaaagaccccttggtcttgcaaacttt
atatgcctcagtacaggggaacaccaggggcaagaagtgggagtgggtgg
gtaggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573321_573553
seq2: B6Ng01-129H03.g_250_483

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCT  50
      |||||||| ||| ||||||||||||||||||||||||| ||||||| |||
seq2  ATGGAGGATCTACAGAAAGTACCCAAGGAGCTAAAGGGGTCTGCAACCCT  50

seq1  ATAGATGGAACAACAATATGAA-TAACCAGTATCCACAGAGCTCATGTCT  99
      |||| ||||||||||||||||| ||||||||| || ||||| |  |||||
seq2  ATAGGTGGAACAACAATATGAACTAACCAGTAACCCCAGAGTTTGTGTCT  100

seq1  CTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATTGGGAAGA  149
      ||||||||||||||| |||||||||||||| |  ||||||||||||||||
seq2  CTAGCTGCATATGTAGCAGAAGATGGCCTATTCAGCCATCATTGGGAAGA  150

seq1  GAGGCCCCTTGGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAACACC  199
       || |||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAGACCCCTTGGTCTTGCAAACTTTATATGCCTCAGTACAGGGGAACACC  200

seq1  AGGGCCAAGAAGTGGGAGAAGGTGGGTAGGGTAG  233
      |||| |||||||||||||  ||||||||||| ||
seq2  AGGGGCAAGAAGTGGGAGTGGGTGGGTAGGGGAG  234