BAC Information

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BAC

Clone NameB6Ng01-134K07
Chromosome2 (Build37)Y (Build37)
Map Location 149,964,782 - 149,965,894385,600 - 385,764
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC433483, LOC383754, LOC100043593, LOC241715, Cst10, EG667048, C530025M09Rik, OTTMUSG00000015750, LOC279056, Zfp120
Downstream geneEG245174, 3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik, Acss1, Vsx1, Entpd6, LOC100043605, Pygb, Abhd12, Gins1, LOC668925, 4930519N13Rik, LOC668926, Nanp, LOC433486, LOC381390
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134K07.bB6Ng01-134K07.g
ACCDH934890DH934891
length1,106176
definitionDH934890|Mus musculus domesticus DNA, BAC clone: B6Ng01-134K07, 5' end.DH934891|Mus musculus domesticus DNA, BAC clone: B6Ng01-134K07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(149,964,782 - 149,965,894)(385,600 - 385,764)
sequence
gaattcatcaggctatttttatttctttctttatttttaaacaaccaacc
gaatacataaatatgtaagtaagtaagtaagtaaataaataaataaataa
ataaataaataagtgaatgggttggtgtcagaggagtaaggctggtggta
ggaaaaaataatgtgaatttgtggctgtttatgcctttgaacaatgtttt
caggagagggtgaaggtggaaaactgtgctgtagatgatagtgaatgctg
aaagactgagaggccattcttgttgaaaactgaatgcatggtgctagaat
cactgtgtctgttgggtaaacatatgcacatgaatgaaagtgtccatgaa
ggacaaaaattaatgggaagaatttaccctgtagctactgtgacatgcag
gtttaacctatctcttgtctgtattgggagctgaagtctggttctctgaa
agggcaatgtttgcatttactcagtgagccatcactccagccccatcacc
tactttcttttgtctcccaaaacgacctgcccaaggtgctactctacaag
atgggttaagttctttcacatcagtcatcaatcaggaaaatctcacatgg
gttagactaaagaccaatcttatggatgcatattctcaaggtttcctttt
cacaattgcctgtagctcagatcaagtgaaaaaaaaatctaacatgaacc
acaacatacatatcatacacatatgaataagtaaggttatataaactagc
atttgatttttaatgctttatgttgatcaaataccagtagatgcatgtta
acatatgttctgacaggtagattggaaatgaattatttcttttatgtatt
catatttaaaaggcaaagtcaagatttattcctccaagagaaaacatatt
tgcagataaaagttctattattgtcaaaaatatttgtaataagtttcctt
tctacagataaaattactggaaattaattaaccccctggagaagcatcca
aatggatgcagatggcttttgttttataaaagggctgccctaaaaaaatc
ttcctccaactaccggtaaaataaacacaacctgtctgggctaaacacag
gggggg
gcaaagtcactttttttttttttttttttttttggtttttcgagacaggg
tttctctgtgtagccctggctgtcctggaactcactctgtagaccaggct
ggcctggaactcagaaatctgcctgcctctgcctcccaagtgctgggatt
aaaggcgtgcaccaccacacccggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_149964782_149965894
seq2: B6Ng01-134K07.b_45_1150

seq1  GAATTCATCAGGCTATTTTTATTTCTTTCTTTATTTTTAAACAACCAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGGCTATTTTTATTTCTTTCTTTATTTTTAAACAACCAACC  50

seq1  GAATACATAAATATGTAAGTAAGTAAGTAAGTAAATAAATAAATAAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACATAAATATGTAAGTAAGTAAGTAAGTAAATAAATAAATAAATAA  100

seq1  ATAAATAAATAAGTGAATGGGTTGGTGTCAGAGGAGTAAGGCTGGTGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATAAGTGAATGGGTTGGTGTCAGAGGAGTAAGGCTGGTGGTA  150

seq1  GGAAAAAATAATGTGAATTTGTGGCTGTTTATGCCTTTGAACAATGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAATAATGTGAATTTGTGGCTGTTTATGCCTTTGAACAATGTTTT  200

seq1  CAGGAGAGGGTGAAGGTGGAAAACTGTGCTGTAGATGATAGTGAATGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAGGGTGAAGGTGGAAAACTGTGCTGTAGATGATAGTGAATGCTG  250

seq1  AAAGACTGAGAGGCCATTCTTGTTGAAAACTGAATGCATGGTGCTAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTGAGAGGCCATTCTTGTTGAAAACTGAATGCATGGTGCTAGAAT  300

seq1  CACTGTGTCTGTTGGGTAAACATATGCACATGAATGAAAGTGTCCATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGTCTGTTGGGTAAACATATGCACATGAATGAAAGTGTCCATGAA  350

seq1  GGACAAAAATTAATGGGAAGAATTTACCCTGTAGCTACTGTGACATGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAAAATTAATGGGAAGAATTTACCCTGTAGCTACTGTGACATGCAG  400

seq1  GTTTAACCTATCTCTTGTCTGTATTGGGAGCTGAAGTCTGGTTCTCTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAACCTATCTCTTGTCTGTATTGGGAGCTGAAGTCTGGTTCTCTGAA  450

seq1  AGGGCAATGTTTGCATTTACTCAGTGAGCCATCACTCCAGCCCCATCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAATGTTTGCATTTACTCAGTGAGCCATCACTCCAGCCCCATCACC  500

seq1  TACTTTCTTTTGTCTCCCAAAACGACCTGCCCAAGGTGCTACTCTACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCTTTTGTCTCCCAAAACGACCTGCCCAAGGTGCTACTCTACAAG  550

seq1  ATGGGTTAAGTTCTTTCACATCAGTCATCAATCAGGAAAATCTCACATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTTAAGTTCTTTCACATCAGTCATCAATCAGGAAAATCTCACATGG  600

seq1  GTTAGACTAAAGACCAATCTTATGGATGCATATTCTCAAGGTTTCCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGACTAAAGACCAATCTTATGGATGCATATTCTCAAGGTTTCCTTTT  650

seq1  CACAATTGCCTGTAGCTCAGATCAAGTGAAAAAAAAATCTAACATGAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATTGCCTGTAGCTCAGATCAAGTGAAAAAAAAATCTAACATGAACC  700

seq1  ACAACATACATATCATACACATATGAATAAGTAAGGTTATATAAACTAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATACATATCATACACATATGAATAAGTAAGGTTATATAAACTAGC  750

seq1  ATTTGATTTTTAATGCTTTATGTTGATCAAATACCAGTAGATGCATGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATTTTTAATGCTTTATGTTGATCAAATACCAGTAGATGCATGTTA  800

seq1  ACATATGTTCTGACAGGTAGATTGGAAATGAATTATTTCTTTTATGTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGTTCTGACAGGTAGATTGGAAATGAATTATTTCTTTTATGTATT  850

seq1  CATATTTAAAAAGGCAAAGTCAAGATTTATTCCTCCAAGAGAACATCATA  900
      ||||||| ||||||||||||||||||||||||||||||||||| | ||||
seq2  CATATTT-AAAAGGCAAAGTCAAGATTTATTCCTCCAAGAGAA-AACATA  898

seq1  TTTGCAGAT-AAAGTTCTATTATTGTCAAAAATATTTGTAATAAGTTTCC  949
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGATAAAAGTTCTATTATTGTCAAAAATATTTGTAATAAGTTTCC  948

seq1  TTTCTACAGATAAAATTACTGGAGATATATTAACCACCTGTAGTAGCATC  999
      ||||||||||||||||||||||| ||  ||||||| |||| || ||||||
seq2  TTTCTACAGATAAAATTACTGGAAATTAATTAACCCCCTGGAGAAGCATC  998

seq1  CAAAATGCATGCAAGATGGCTATGTATATAATAAATGGGCTGCCATAATA  1049
      | ||||| |||| |||||||| | | | | ||||| |||||||| ||| |
seq2  C-AAATGGATGC-AGATGGCT-TTTGTTTTATAAAAGGGCTGCCCTAA-A  1044

seq1  CATATCTTCTCCAAACTAACTGTAAATAATAAACACAGCATGTCTGGGCT  1099
       | ||||||  | ||||| | ||||  |||||||||| | ||||||||||
seq2  AAAATCTTCCTCCAACTACCGGTAA--AATAAACACAACCTGTCTGGGCT  1092

seq1  AAAGCAAGGGGGGG  1113
      |||   ||||||||
seq2  AAACACAGGGGGGG  1106

seq1: chrY_385600_385764
seq2: B6Ng01-134K07.g_91_253

seq1  TTTTTTTTTTTTTTTTTTTTGGTTTTTTGAGACAGGTTTTCTCTATATAT  50
      ||||||||||||||||||||||||||| |||||||| ||||||  | | |
seq2  TTTTTTTTTTTTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTC--TGTGT  48

seq1  AGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACT  100
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTGGAACT  98

seq1  CAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCTTGCG  150
      |||||||||||||||||||||||||| |||||||||||||||||| ||| 
seq2  CAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCA  148

seq1  CCACCACACCCGGCC  165
      |||||||||||||||
seq2  CCACCACACCCGGCC  163