BAC Information

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BAC

Clone NameB6Ng01-136E04
ChromosomeY (Build37)
Map Location 385,615 - 385,756
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y
Downstream geneTspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136E04.bB6Ng01-136E04.g
ACCDH936080DH936081
length1,0291,222
definitionDH936080|Mus musculus domesticus DNA, BAC clone: B6Ng01-136E04, 5' end.DH936081|Mus musculus domesticus DNA, BAC clone: B6Ng01-136E04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccaaagtaacaaagtcagaaatgaaaaggggagcataacaacag
acattaaggaaatccagataattatataattataattctataaaaataaa
aatatgccaggcgtggtggctcatgcctttaatcccagcactcaggaggc
agaggcaggaagatttctgagttcaaggccagcctggtctacagagtgag
ttccaggacagccagggctactcagagaaaccctgtctcaaagaaccaaa
aataaataaataaaaattaaaaataaaaatatataattatatatgcatat
atagttatatgttgtatatgacaatctttaaaacttttattccaccaaat
aggaaaatctaaaagaaattaataattttttcaattcatgtcacttaaaa
aagttaaaaccagtaagcaatttagatagaagtacaactactattgcata
ttcattaagtttctcaatcaaaaaactttcagggtcagagggttttagaa
cagacttctgtgaaaattgcaaagagatatattaatacttttcaatattt
cccaccaagcagatacagaaaagttttttcccaatttattttatgaagcc
atagttatcctgatactcaaaccacataaaaagccaacaaagaaagagaa
ttgcataccaatatttcctatgagaaaacacaaaaaaatactcaataaag
tatttgcaaacagagttcaagaacacatcaaaagatcattgcccacaatc
aagtatcccagagatacttgattatccaccatataaacaaactgaaagac
aataattatttcattagatacagaaaatgcctttgaaaaaaattcaatac
cccttcatggttaaagtcataaagggattagggatacaagtgacatactt
caacataaaatgggcaatttgcattaacttaaatggagacaactaaaagc
aattctacagtcatcagaaacatccagggtgttccatcccttcatatcta
ggcaatatagtacttgacaacatagctaa
gaattcatctgtctctagactttttacacagaaggcttattataactatt
tcaatttcatcatttgttatgtgcctgtttaggttgtagatatcttcttg
gtttcattttggttgtttggttgaacccaaaaattcatttattttccctt
agattttcagtttaacagaatactagattttaaaagtattctcttttatt
attctgaacttcttatgtgtctgtttccttgttcaattttgattctgtta
atttagatcttctctttgtttcttttatctggttgatccaaggatctgtc
agtcttgcttatcttcacaaaggactggtttttagatgccttaattcttt
gtaatgtttttggttatttgtttctgtttaattggtttctgctttgatta
ttattttattctctgctgtcaattgggtttggaattggttgttctcattt
attaaacctttgtatttaaatcaccaagcaatgtaatttttttttttttt
ttttttggtttttgaatgtagaatccaagaactataaattccccaatatg
aattctcttaatgtgttccagtagttttgttatgttgtgtttttattttt
atttagtttcagaaagctttttatttttatttctttttttattcattcat
tatctagtaataaggtgtttgatatccagaaatttgtatgtttacaagaa
atttgctttctgttaattttaagatttatttttcttttctatttcaattt
ttttcttttgctttgtggtcagacagataaaggagtgatttcaatgtttt
tgagtttgtaaagatctggtactgaaaggtcagttcaggacctttttgaa
atccaccagacccttctcctccaaatggggaaggctaattacattctaca
gattgcacctgcaggggggggagacttaccaggtaacaccattccgcaga
agacccttcctctccattcctagaggaccatcaatttaaaggtacactgt
tttgtcatcaccatgtgcctatggctgctgctcctgaactgtgttagact
gaccaacagctgggaagtcactctcctcttcggggtaggagttcccaccc
ttttgaattacatttccctgccttgcatcaatgcatgtcttggattacac
tcctagagtctcggaacagtcagatctacgtccatgaggagctaccttgg
ccctcaataaatgcctaacact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_385615_385756
seq2: B6Ng01-136E04.b_155_294 (reverse)

seq1  TTTTTGGTTTTTTGAGACAGGTTTTCTCTATATATAGCCCTGGCTGTCCT  50
      ||||||||| ||||||||||| ||||||  |   ||||||||||||||||
seq2  TTTTTGGTTCTTTGAGACAGGGTTTCTC--TGAGTAGCCCTGGCTGTCCT  48

seq1  GGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGC  100
      ||||||||||||||||||||||||||||| |||||||||||||| |||||
seq2  GGAACTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTTCCTGC  98

seq1  CTCTGCCTCCCGAGTGCTGGGATTAAAGGCTTGCGCCACCAC  142
      |||||||||| ||||||||||||||||||| || ||||||||
seq2  CTCTGCCTCCTGAGTGCTGGGATTAAAGGCATGAGCCACCAC  140