BAC Information

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BAC

Clone NameB6Ng01-136F20
ChromosomeY (Build37)9 (Build37)
Map Location 573,321 - 573,39081,367,058 - 81,367,602
singlet/doubletsingletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136F20.bB6Ng01-136F20.g
ACCDH936154DH936155
length500780
definitionDH936154|Mus musculus domesticus DNA, BAC clone: B6Ng01-136F20, 5' end.DH936155|Mus musculus domesticus DNA, BAC clone: B6Ng01-136F20, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(573,321 - 573,390)(81,367,058 - 81,367,602)
sequence
gaattctttgtatatgttctatattacctctatatcagatgtagggttag
taaagatcttttcccagtctgtgagttgccatttcatcctattgacagtg
tgcttaaccttacaaaagcttttcaactttatgaggtcccatttgtctat
tgtttatcttacagcataagccactgatgttctattcagaaaaaatttgc
ctgtacccatgtattcaaggctcttcctcactttctcctctgttagatta
agtgtatctggttttacatggaggtccttgatccatttggacttaaacat
tgtacaaggggctaaaaatggatctatttgcattcttctacatgcagacc
accagttgaacccacatcattttttgaaaatgctgtcttttttccattgg
atgattttaccttcttttgaaagatcaacaatggaggagctagagaaatt
acccaaggagctaaagggaactgcaaccctataggtggaacaacaatatg

gaattcatagcaagctctctgccagtgagctagctatagccaattccagt
tttttatgtatccttgattaatatttggtggggtttttgtttgtttggtt
ggtttttgttgttgtcgtcatcgtttttaactaggatcatgtccattttt
ccacactatctggtgtgttgacaataattgttcataactgcccttacttc
tctttttagtgcctgagggagacgttatatctctttgtcattttagtttt
catttagttgaaatataatttcataatttttctctgatcttgaaaaatat
ttgccaagtttgtttacttttctaaactgacttagctctgttgattgttt
ttccattggttttctttgtttgatttagttcccatctcctctccattgct
tcctacctgcaggtttagtttaatcatcccattttaattgtttcaagtat
gaagggtaaagttagatggtgtagagttgttaatttcatcatagatttga
aaccaggaacttattatagtagccaaggttggtcttaaactcaccatccc
cctgccccagtctcctgagaggtaggaatgctggaattataggtctacac
tagcatacccaaaccactgctgggttttaacacttatttttaaagcactg
tttatgttctggtgaattatttttcctgttagtttgccccaagattactt
tctgaaacccttttgatctgcttttttgacatatggctaactacaactaa
ggattttagtttataaactttgatcctaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573321_573390
seq2: B6Ng01-136F20.b_480_549

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCT  50
      |||||||||||||||||| |||||||||||||||||||| |||||| |||
seq2  ATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGAACTGCAACCCT  50

seq1  ATAGATGGAACAACAATATG  70
      |||| |||||||||||||||
seq2  ATAGGTGGAACAACAATATG  70

seq1: chr9_81367058_81367602
seq2: B6Ng01-136F20.g_297_845 (reverse)

seq1  TTTATGATCAAAGTTTATAAACTAAAATCCTTAGTTGTAGTTAGCCATAT  50
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGATCAAAGTTTATAAACTAAAATCCTTAGTTGTAGTTAGCCATAT  50

seq1  GTC-AAAAAGCAGATCAAAAGGGTTTCAGAAAGT-ATCTTGGGGC-AACT  97
      ||| |||||||||||||||||||||||||||||| |||||||||| ||||
seq2  GTCAAAAAAGCAGATCAAAAGGGTTTCAGAAAGTAATCTTGGGGCAAACT  100

seq1  AACAGGAAAAATAATTCACCAGAACATAAACAGTGCTTT-AAAATAAGTG  146
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AACAGGAAAAATAATTCACCAGAACATAAACAGTGCTTTAAAAATAAGTG  150

seq1  TTAAAACCCAGCAGTGGTTTGGGTATGCTAGTGTAGACCTATAATTCCAG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACCCAGCAGTGGTTTGGGTATGCTAGTGTAGACCTATAATTCCAG  200

seq1  CATTCCTACCTCTCAGGAGACTGGGGCAGGGGGATGGTGAGTTTAAGACC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTACCTCTCAGGAGACTGGGGCAGGGGGATGGTGAGTTTAAGACC  250

seq1  AACCTTGGCTACTATAATAAGTTCCTGGTTTCAAATCTATGATGAAATTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGGCTACTATAATAAGTTCCTGGTTTCAAATCTATGATGAAATTA  300

seq1  ACAACTCTACACCATCTAACTTTACCCTTCATACTTGAAACAATTAAAAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTCTACACCATCTAACTTTACCCTTCATACTTGAAACAATTAAAAT  350

seq1  GGGATGATTAAACTAAACCTGCAGGTAGGAAGCAATGGAGAGGAGATGGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGATTAAACTAAACCTGCAGGTAGGAAGCAATGGAGAGGAGATGGG  400

seq1  AACTAAATCAAACAAAGAAAACCAATGGAAAAACAATCAACAGAGCTAAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAATCAAACAAAGAAAACCAATGGAAAAACAATCAACAGAGCTAAG  450

seq1  TCAGTTTAGAAAAGTAAACAAACTTGGCAAATATTTTTCAAGATCAGAGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTAGAAAAGTAAACAAACTTGGCAAATATTTTTCAAGATCAGAGA  500

seq1  AAAATTATGAAATTATATTTCAACTAAATGAAAACTAAAATGACAAAGA  545
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATGAAATTATATTTCAACTAAATGAAAACTAAAATGACAAAGA  549