BAC Information

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BAC

Clone NameB6Ng01-137K15
ChromosomeY (Build37)18 (Build37)
Map Location 573,325 - 573,36058,733,861 - 58,734,522
singlet/doubletsingletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137K15.bB6Ng01-137K15.g
ACCDH937125DH937126
length485895
definitionDH937125|Mus musculus domesticus DNA, BAC clone: B6Ng01-137K15, 5' end.DH937126|Mus musculus domesticus DNA, BAC clone: B6Ng01-137K15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(573,325 - 573,360)(58,733,861 - 58,734,522)
sequence
gaattcttagacaaatggatggatctggaggatatcatcctgagtgaggt
aacccaatcacaaaagaacacacatgatatgcactcactgataagtggat
attagtcagaagctcagaatacccaagatacaatttgcaaaacacatgaa
actcaagaataaggaagaccaaagtgtggacacttcaatccttcttagaa
gggggaacaaaatacccatggaagaagttacagagacaaagttcggaaca
gagactgaaggcatgaccatccagaaacttccacatctggggattcatcc
cataaacaaacaccaaacccagacaactattgcagatgccaacatgctga
caggagcctgatacagctgtctcctgagaggctttgccagtgcctgacta
atacagaagtggatgctcacagtcatccattagatggaacacagggtgaa
ggagctagagaaagtacccaaggagctgaagggat
gaattctcagtgtgagggtaaaggacaaactcaaggcgataacatagcag
ctggagagggctgaaggagaaggaaggaagtctgggacagggatgtccaa
aagtcactttgatagactacatgggagtatttacagctgtgtgtccttgt
tgaggaagaggtggtatcgcaaattagttcaatataattgctatctcagg
atccattttgttgggaacccagttgtccctgtcagctttggagaactttc
accatgagacagtgtgctacagtaactaacatgtccccatgtcaccgagc
caaaccctcacccggtaggttttgaccaggagaaacctaatgatcaacac
cagagacatgtaaattcccttctttatgagtattttctttttcttttctt
ttttttcccctgagacagggtttctctgtatagctctggctgtcctggaa
ctcactttgtaaaccaggctggcctcgaactgaccatattcatctttata
atctaagggacagaatcccattgtcccctctctcacacagcacttaagct
agatttccttgctgccccttgacctgcaggcagctctcacctctctgaga
cctgtgtaactcattctttctctttcttatcttttgcttccatccttcac
catgtcttcacctgccacacacaagcaaatctccctccagtggacagtct
cttggagttaaccatcttgggcttccagacaatatgagagcgccttcaag
actaaattgtcagagttctggagctggatcaaagtcttcaaatttttcag
tgtccattgatcttacacactaaggaaatctcagatgagattaaggccaa
tgagaatgggagatttgccaaatggaaacactgggcttttaagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573325_573360
seq2: B6Ng01-137K15.b_495_530

seq1  AGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGAT  36
      |||||||||||||||||||||||||||| |||||||
seq2  AGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGAT  36

seq1: chr18_58733861_58734522
seq2: B6Ng01-137K15.g_68_729 (reverse)

seq1  GGTGAAGACATGGTGAAGGATGGAAGCAAAAGATAAGAAAGAGAAAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGACATGGTGAAGGATGGAAGCAAAAGATAAGAAAGAGAAAGAAT  50

seq1  GAGTTACACAGGTCTCAGAGAGGTGAGAGCTGCCTGCAGGTCAAGGGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTACACAGGTCTCAGAGAGGTGAGAGCTGCCTGCAGGTCAAGGGGCA  100

seq1  GCAAGGAAATCTAGCTTAAGTGCTGTGTGAGAGAGGGGACAATGGGATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGAAATCTAGCTTAAGTGCTGTGTGAGAGAGGGGACAATGGGATTC  150

seq1  TGTCCCTTAGATTATAAAGATGAATATGGTCAGTTCGAGGCCAGCCTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTTAGATTATAAAGATGAATATGGTCAGTTCGAGGCCAGCCTGGT  200

seq1  TTACAAAGTGAGTTCCAGGACAGCCAGAGCTATACAGAGAAACCCTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAGTGAGTTCCAGGACAGCCAGAGCTATACAGAGAAACCCTGTCT  250

seq1  CAGGGGAAAAAAAAGAAAAGAAAAAGAAAATACTCATAAAGAAGGGAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAAAAAAAAGAAAAGAAAAAGAAAATACTCATAAAGAAGGGAATT  300

seq1  TACATGTCTCTGGTGTTGATCATTAGGTTTCTCCTGGTCAAAACCTACCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTCTCTGGTGTTGATCATTAGGTTTCTCCTGGTCAAAACCTACCG  350

seq1  GGTGAGGGTTTGGCTCGGTGACATGGGGACATGTTAGTTACTGTAGCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGGGTTTGGCTCGGTGACATGGGGACATGTTAGTTACTGTAGCACA  400

seq1  CTGTCTCATGGTGAAAGTTCTCCAAAGCTGACAGGGACAACTGGGTTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCATGGTGAAAGTTCTCCAAAGCTGACAGGGACAACTGGGTTCCC  450

seq1  AACAAAATGGATCCTGAGATAGCAATTATATTGAACTAATTTGCGATACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATGGATCCTGAGATAGCAATTATATTGAACTAATTTGCGATACC  500

seq1  ACCTCTTCCTCAACAAGGACACACAGCTGTAAATACTCCCATGTAGTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTCCTCAACAAGGACACACAGCTGTAAATACTCCCATGTAGTCTA  550

seq1  TCAAAGTGACTTTTGGACATCCCTGTCCCAGACTTCCTTCCTTCTCCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTGACTTTTGGACATCCCTGTCCCAGACTTCCTTCCTTCTCCTTC  600

seq1  AGCCCTCTCCAGCTGCTATGTTATCGCCTTGAGTTTGTCCTTTACCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCTCCAGCTGCTATGTTATCGCCTTGAGTTTGTCCTTTACCCTCA  650

seq1  CACTGAGAATTC  662
      ||||||||||||
seq2  CACTGAGAATTC  662