BAC Information

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BAC

Clone NameB6Ng01-144K21
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,577
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144K21.bB6Ng01-144K21.g
ACCDH942293DH942294
length4011,182
definitionDH942293|Mus musculus domesticus DNA, BAC clone: B6Ng01-144K21, 5' end.DH942294|Mus musculus domesticus DNA, BAC clone: B6Ng01-144K21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tcccataatcagcttccaaaagctgacaccattgcatacactagcaagat
tttgctgaaaggacccagatatagctgtctcttatgagactatgccgggg
cctagcaaacacagaagtggatgctcagagtcagctattggatggatcac
agggaccccaatggagaagctagagaaagtacccaaggaactaaagggat
ctgcaaccctataggtggaacaacattatgaactaaccagtaccccgaag
ctcttgactctagctgcatatgtatcaaaagatggcctagttggccatca
ctggaaagagaggctcattggacttgcaaactttatatgccccagtacag
gggaacgccagggccaaaaagtgggactgggtaagtaggggagtgggggg
g
gaattcaataggagatagaaatactggagagaatgcaaattgaaatacag
atggagttagaaaacactacaactcaactagaaaatgcaaaggaaagcct
tacagttagatatatcaagcataagaaagaatatcaggacttaaagataa
agtaggggatctgaacaaaataagtaagcagtataaaaaaaatcaaaaat
accagaaagtaacatacaagaaatgtgggacaccatgataaacaaaacaa
aaaacccaaacaacaacagcaacaacaacaaaacaaacctttgaattata
ggcatagataagggagaagaattccgagctaatggaatagaccaaaactt
taacaagatcatagaagaaaacttcctcaaattcaggaaagacacaccca
tacagatataggaagcatagagaacatcaactagacaagaccagaaaaat
ccctactgcataccatagttaaaaactaagcacacataacaaagaaagtg
tattgaaagttgcaagagaaaaacacaagtcacatacaaaagaaaaccta
tgtgatcctagctgatttcttaatagaaaatttgaaagaagagcctagag
caatgtatcctcagtcctaaaagactatgatggtcactctagacgaatat
actcccccaaagctacctgtcatggttgaaggagtaagtatatctctgtg
atataaacagctgaaaaggctgtgtctaacaaatcaaacctaaagaaaac
acaagcagcattatttcatgttgaagagagaagtgagcatagaagagatc
actgaaaaaaacaagaagccataattattaaaatgcaaagtaacatggaa
aacaacacaaaatcaacaacatggcgactttccttcccacaaaccctcgc
gcccttctttcctacttgggcccggcagatggctcccgcaaagaatggtg
gcgagaagaagaaggtcgtctgccatcaacaagtggtgactcgagaatac
accatcacatcacagcgcatcatggagtgggtttcagagcatgctctcgg
cactcaaaaatcgagaggcatgaggaatgggaacgaatgtgcgcatgaac
cagctcattaagcgtctgccaaggataggaacgtcctattcatcagttgc
tgtccagaacgttatgtgagatgaggattcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870577
seq2: B6Ng01-144K21.b_224_455

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTAGAGAAAGTACCCAAGGAACTAAAGGGATCTGCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||||||||||||||||| ||||||  ||||||||||||| |||||||
seq2  ACAACATTATGAACTAACCAGTACCCCGAAGCTCTTGACTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | |||||||||||||||||||| |||||||||||||||||||||| ||||
seq2  ATGTATCAAAAGATGGCCTAGTTGGCCATCACTGGAAAGAGAGGCTCATT  150

seq1  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200

seq1  AGGGGCAGTGGGTGGGTAGGGGAGTGGGGGTG  232
      || || | |||||  ||||||||||||||| |
seq2  AGTGGGACTGGGTAAGTAGGGGAGTGGGGGGG  232