BAC Information

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BAC

Clone NameB6Ng01-155L01
ChromosomeY (Build37)13 (Build37)
Map Location 573,322 - 573,45089,488,856 - 89,489,391
singlet/doubletsingletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155L01.bB6Ng01-155L01.g
ACCDH950402DH950403
length500530
definitionDH950402|Mus musculus domesticus DNA, BAC clone: B6Ng01-155L01, 5' end.DH950403|Mus musculus domesticus DNA, BAC clone: B6Ng01-155L01, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(573,322 - 573,450)(89,488,856 - 89,489,391)
sequence
gaattctttgttcagctctgagccccattttttaatggggttattagatt
ttctgaagtccatcttcttgtgttctttatatatattggatattagtccc
ctatctgatttgggataagtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgatggtgtcttttgccttgcagaagcttttgccatatc
cagggatccatcccataatcagcttccaaacgctgacaccattgcataca
ctagtaagattttgctgaaaggaccctgatatagctgtctcttgtgagac
tatgccgggacctcgcaaacacagaagtggatgctcacagtcagctattg
gatgggtcacacggcccccagtggaggagctagagaaaatacccaaggag
ctaaagggaactgcaaccctataggtggaacaacaatatgaactaaccag
taccccggagctcttgtctctagctgcatatgtatcaaaagatggcctag

cattacagattgttgtgagtcaccatgtggttgttgggaaccaggaccac
tgtaagagaagccagtgctattaactgctgagccatctatccaacccttt
tgctattgtttgaaggttgttttgttccttagtttctgtttcctctttgg
tcttctagtctttgtgatctatatttctggtggccaccattacctctgct
ccagcagaaagtctccaccagagttgaagttgtatttctcatagttagca
ttgcctttggtccagtaggggctctctgctcttctgaatggcctagtctg
ttcatgagcagtgggtatctccctgtgtaagcatggggtcactgcagcaa
ggtcagttggtggtagtatcccgtggtgttgacagcagtttggctctttc
agctccaagccaagagagtgaggggatttagagggaggaaggggctctta
gctattctggctggtatgacttgtacctgggcagtggttttccaccctag
atgggtgtaggggcaggttggggaagaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573322_573450
seq2: B6Ng01-155L01.b_416_544

seq1  TGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCTA  50
      ||||||||||||||||| |||||||||||||||||||| |||||| ||||
seq2  TGGAGGAGCTAGAGAAAATACCCAAGGAGCTAAAGGGAACTGCAACCCTA  50

seq1  TAGATGGAACAACAATATGAA-TAACCAGTATCCACAGAGCTCATGTCTC  99
      ||| ||||||||||||||||| ||||||||| || | |||||| ||||||
seq2  TAGGTGGAACAACAATATGAACTAACCAGTA-CCCCGGAGCTCTTGTCTC  99

seq1  TAGCTGCATATGTATCAGAAGATGGCCTAG  129
      ||||||||||||||||| ||||||||||||
seq2  TAGCTGCATATGTATCAAAAGATGGCCTAG  129

seq1: chr13_89488856_89489391
seq2: B6Ng01-155L01.g_65_600

seq1  GAATTCCATTACAGATTGTTGTGAGTCACCATGTGGTTGTTGGGAACCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTACAGATTGTTGTGAGTCACCATGTGGTTGTTGGGAACCAG  50

seq1  GACCACTGTAAGAGAAGCCAGTGCTATTAACTGCTGAGCCATCTATCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACTGTAAGAGAAGCCAGTGCTATTAACTGCTGAGCCATCTATCCAA  100

seq1  CCCTTTTGCTATTGTTTGAAGGTTGTTTTGTTCCTTAGTTTCTGTTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTGCTATTGTTTGAAGGTTGTTTTGTTCCTTAGTTTCTGTTTCCT  150

seq1  CTTTGGTCTTCTAGTCTTTGTGATCTATATTTCTGGTGGCCACCATTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTCTTCTAGTCTTTGTGATCTATATTTCTGGTGGCCACCATTACC  200

seq1  TCTGCTCCAGCAGAAAGTCTCCACCAGAGTTGAAGTTGTATTTCTCATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCCAGCAGAAAGTCTCCACCAGAGTTGAAGTTGTATTTCTCATAG  250

seq1  TTAGCATTGCCTTTGGTCCAGTAGGGGCTCTCTGCTCTTCTGAATGGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATTGCCTTTGGTCCAGTAGGGGCTCTCTGCTCTTCTGAATGGCCT  300

seq1  AGTCTGTTCATGAGCAGTGGGTATCTCCCTGTGTAAGCATGGGGTCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTTCATGAGCAGTGGGTATCTCCCTGTGTAAGCATGGGGTCACTG  350

seq1  CAGCAAGGTCAGTTGGTGGTAGTATCCCGTGGTGTTGACAGCAGTTTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGGTCAGTTGGTGGTAGTATCCCGTGGTGTTGACAGCAGTTTGGC  400

seq1  TCTTTCAGCTCCAAGCCAAGAGAGTGAGGGGATTTAGAGGGAGGAAGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAGCTCCAAGCCAAGAGAGTGAGGGGATTTAGAGGGAGGAAGGGG  450

seq1  CTCTTAGCTATTCTGGCTGGTATGACTTGTACCTGGGCAGTGGTTTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGCTATTCTGGCTGGTATGACTTGTACCTGGGCAGTGGTTTTCCA  500

seq1  CCCTAGATGGGTGTAGGGGCAGGTTGGGGAAGAAGG  536
      ||||||||||||||||||||||||||||||||||||
seq2  CCCTAGATGGGTGTAGGGGCAGGTTGGGGAAGAAGG  536