BAC Information

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BAC

Clone NameB6Ng01-163A18
ChromosomeY (Build37)Y (Build37)
Map Location 573,463 - 573,550573,331 - 573,550
singlet/doubletsingletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163A18.bB6Ng01-163A18.g
ACCDH955731DH955732
length217426
definitionDH955731|Mus musculus domesticus DNA, BAC clone: B6Ng01-163A18, 5' end.DH955732|Mus musculus domesticus DNA, BAC clone: B6Ng01-163A18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(573,463 - 573,550)(573,331 - 573,550)
sequence
gaattctcaactgaggaataccgagtggctgagaagcacctaaaaaaaaa
atgttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctga
gattccatctcacaccagtcagaatggcagggaagagaggccccttggtc
tagaaaactttatatgcctcagtacgggggaacgccagggccaagaagtg
ggagtgggtgggtaggg
tttgtttgtctctgagccccatttttaatggggttatttgattttctgga
gtccaccttcttgagttctttatatatattggatattagtcccctatctg
atttaagattggtaaagattctttcccaatctgttggtggcctttttgtc
ttattgaaggtgtcttttgccttacagaaactttgtaattttatgaagtc
ccatttagagaaagtacccaaggagctaaaggagtctgcaaccttatagg
tggaacaacaatatgaactaaccagtacccccagagctcttgtctctagc
tgcatatgtatcagaagatggcctagccggccatcattgggaagagaggc
cccttggtcttgcaaactttatatgcctcagtacgggggaatgccagggc
caagaagtgggagtgggtggggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573463_573550
seq2: B6Ng01-163A18.b_172_259

seq1  GGGAAGAGAGGCCCCTTGGTCTTGCAAACTTTATATGCCCCAGTACAGGG  50
      |||||||||||||||||||||| | |||||||||||||| |||||| |||
seq2  GGGAAGAGAGGCCCCTTGGTCTAGAAAACTTTATATGCCTCAGTACGGGG  50

seq1  GAACACCAGGGCCAAGAAGTGGGAGAAGGTGGGTAGGG  88
      |||| ||||||||||||||||||||  |||||||||||
seq2  GAACGCCAGGGCCAAGAAGTGGGAGTGGGTGGGTAGGG  88

seq1: chrY_573331_573550
seq2: B6Ng01-163A18.g_279_499

seq1  TAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCTATAGATGGAA  50
      |||||||||||||||||||||||||||  ||||||| | ||||| |||||
seq2  TAGAGAAAGTACCCAAGGAGCTAAAGGAGTCTGCAACCTTATAGGTGGAA  50

seq1  CAACAATATGAA-TAACCAGTATCCACAGAGCTCATGTCTCTAGCTGCAT  99
      |||||||||||| ||||||||| || |||||||| |||||||||||||||
seq2  CAACAATATGAACTAACCAGTACCCCCAGAGCTCTTGTCTCTAGCTGCAT  100

seq1  ATGTATCAGAAGATGGCCTAGTTGGCCATCATTGGGAAGAGAGGCCCCTT  149
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  ATGTATCAGAAGATGGCCTAGCCGGCCATCATTGGGAAGAGAGGCCCCTT  150

seq1  GGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCAAGA  199
      |||||||||||||||||||||| |||||| ||||||  ||||||||||||
seq2  GGTCTTGCAAACTTTATATGCCTCAGTACGGGGGAATGCCAGGGCCAAGA  200

seq1  AGTGGGAGAAGGTGGGTAGGG  220
      ||||||||  |||||| ||||
seq2  AGTGGGAGTGGGTGGGGAGGG  221