BAC Information

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BAC

Clone NameB6Ng01-229G19
ChromosomeY (Build37)
Map Location 369,469 - 370,141
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y
Downstream geneTspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229G19.bB6Ng01-229G19.g
ACCGA042577GA042578
length1,0471,166
definitionB6Ng01-229G19.b B6Ng01-229G19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
agggaatccaaaatctcttcaatcctcaggcatctgcatttctcccccaa
ccctgtaccaacacacacatcattataataataaaaataaatctttaata
aagtgacaatacaaagaagctgcatgttaaatcaaactacacgtgtagag
caagactgttaaaagaaaatttcagaaagaactcaagaaggtggactcca
gaaaatcaaataaccccattaaaaaatggggctcagagctaaacaaagaa
ttctcacctgaggaataccgaatggctgagaagcacctgaaaaaatgttc
aacagccttaatcatcagggaaatgtaaatcaaaacaaccctgagattcc
acctcacaccagtcagaatggctaagatcaaaaattcaggtgacagcaga
tgctggcgcggatgtggagaaagaggaacactcccattggtgggattgca
agcttgtactctggaaatcagtctggtggttcctcagaaaattggacata
gtactaccggagagtcccgcaatacttctcctgggcatatatatgcagaa
gatgttccaaccggtaagaaggacacatgctccactatgttcatagcagc
cttatttataatagccagaagctggaaagaacccagatgcccctcaacag
aggaatggatacagaaaatgtggtacatttacacagtggagtactactca
gcttttaaaaagaatgaatttatgaaattcctaggcaaatggatggacct
gaagggcatcatcctgagtgaggtaacccaatcacaaaagaactcacaca
atatgtactcactgataagtggatattagcccagaaatttagaataccca
agatataagatacaatttgctaaacgcatgaaactcaagaagatcaaaga
ccaaagtgtggacactttgcccctttcttagaattgggaacaaaacaccc
atataggagttacagagacaagtttgaggtgagacgaaaggattgaccat
ctagagactgccatatcctgggatccatcccagatcagcttccaaac
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcagatgtgttagggtgtcctggactgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggtttctgttggtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcaa
tcagcaggcgtgggagacaagctctctcctctgagtttcagtggtcagag
cagtctctgcaggcaagatctcctctttcggggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaagatgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccggttgtctggagt
cgaagatgtcgccacctcagaagctctgtggctctcgccaggaaggtggc
cggttgtctggagacgaagatggcgccaccccagaagctctgagactctc
gcccgtaccagaaacggctggcctctgtattccacacggtcacccgtgca
gcctgccctccgcagagtcccggagccaagaaggctcccgccggcgcctg
tgacacaaacctctcaggccgggcagacccccgtgctctcaccaggaagg
tggccggctgtctggagctgaaaatggtgccgcctcagaagctctgtggc
tctcgccaggaacgtggctggttgtccggagatgtcgccgcctcagaagc
tctgtggctctcgccaggaaaggtggctggttgtctggagatgtcgctgc
ctccgaagctctgtggctctcgccaggaaagtggctggttgtctgaagat
gtcgccgccccagaagctctgcgactctgggccgtaccagaaacggctgg
cctctgtattccacacggtctcccgtgcagcctgccctccgcagagtccc
gagcagagctctgcggcgcctgtgacacaaaccttctcagcggcagaccc
agtgcctcttgacaggagtggcgcctgtcttgactgagatctttactaca
gatttgaaaactattctgacgattatcattaattaatgggttgcaaaccc
gataaatttttatggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_369469_370141
seq2: B6Ng01-229G19.b_56_728

seq1  AGGGAATCCAAAATCTCTTCAATCCTCAGGCATCTGCATTTCTCCCCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATCCAAAATCTCTTCAATCCTCAGGCATCTGCATTTCTCCCCCAA  50

seq1  CCCTGTACCAACACACACATCATTATAATAATAAAAATAAATCTTTAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTACCAACACACACATCATTATAATAATAAAAATAAATCTTTAATA  100

seq1  AAGTGACAATACAAAGAAGCTGCATGTTAAATCAAACTACACGTGTAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACAATACAAAGAAGCTGCATGTTAAATCAAACTACACGTGTAGAG  150

seq1  CAAGACTGTTAAAAGAAAATTTCAGAAAGAACTCAAGAAGGTGGACTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTGTTAAAAGAAAATTTCAGAAAGAACTCAAGAAGGTGGACTCCA  200

seq1  GAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAA  250

seq1  TTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGAAAAAATGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGAAAAAATGTTC  300

seq1  AACAGCCTTAATCATCAGGGAAATGTAAATCAAAACAACCCTGAGATTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCTTAATCATCAGGGAAATGTAAATCAAAACAACCCTGAGATTCC  350

seq1  ACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGA  400

seq1  TGCTGGCGCGGATGTGGAGAAAGAGGAACACTCCCATTGGTGGGATTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGCGCGGATGTGGAGAAAGAGGAACACTCCCATTGGTGGGATTGCA  450

seq1  AGCTTGTACTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAATTGGACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTACTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAATTGGACATA  500

seq1  GTACTACCGGAGAGTCCCGCAATACTTCTCCTGGGCATATATATGCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTACCGGAGAGTCCCGCAATACTTCTCCTGGGCATATATATGCAGAA  550

seq1  GATGTTCCAACCGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTCCAACCGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGC  600

seq1  CTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAG  650

seq1  AGGAATGGATACAGAAAATGTGG  673
      |||||||||||||||||||||||
seq2  AGGAATGGATACAGAAAATGTGG  673