BAC Information

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BAC

Clone NameB6Ng01-230E20
ChromosomeY (Build37)
Map Location 574,050 - 574,170
singlet/doubletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230E20.bB6Ng01-230E20.g
ACCGA043201GA043202
length1,012941
definitionB6Ng01-230E20.b B6Ng01-230E20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagttctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgacttgcagaagctttgcagtttca
tgaggtcccatttgtcgattctcgatcttacagcgcaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataggtatggatcaatttgc
attcttctacatgataaccaccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactagatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcactataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcagattgctctttctaattcattgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttgatcctgccaatccatgagcatgggagatctttccattttctgagatc
ttctttaatttctttcttcagagacttgaagtttttatcatacagatctt
tcacttccttagttagagtcacgccgagatatttttatattatttttgac
tattgagaaggggtgtgtttccctaatttctttctcagcctgtttattct
ttgtgtagagaa
gaattctcactagagctctactcaaaatatacagatcctggaaatgacct
agatgttcctcaagagaagaatggttaaagaaattgtggcacatttacac
aatggggtattactcagctgttaataaaatgacatcaggaaatttgtagg
caagtggatggaactagaaaaaaaaaatcatcctaggggctggagagatg
gctcagaggttaagtacactgattgctcttccagaggtcctgagttcaat
tcccagcaaccacatggtggctcacaacatctgtaatgggatctgatgcc
ctcttcttgtgtgtctgaagacagtgacagtgtcaacatatataaaataa
ataagtaaacctttgaaaaaaacccacaacatcccgagtgaggtatccca
gaaagacaaatatggtatgtattcacttacatgtggatattagctgttaa
gtcaataataagtaatttacaatccacagaatgtaggtacagtataaggg
atttggggagtgtactgactagttttgtgtcaacttgaaacaagctgtag
ttatcacagagaaaggagcttcagttgaggaaatgcctccatgaaatcca
gctgtaaggcattttctcaattagtgatcaagggggaagggccccttgtg
ggtgtgaccatctctgggctggtagtcttgggttctataagagagcaggc
tgagcaagccagggaaaagcaacccagtaaggaacatcccttccatggcc
tctgcatcagctcctgctccctgctctgcttgagttccagtcctgaattt
cttttgtgatgaacagcaatgttggaagtgtaagctgaataaaccctttc
ttccccacttgcttctttggtcatgatgtttggtgcagggaatagaaacc
ctgactagacagggaggcatatagattttgttagggaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_574050_574170
seq2: B6Ng01-230E20.g_255_373 (reverse)

seq1  AAGAGAGCATCAGATCCCTATTATAGATGTTTGTGAGCCACCATGTGGTT  50
      ||||| |||||||||||| |||| ||||| ||||||||||||||||||||
seq2  AAGAGGGCATCAGATCCC-ATTACAGATG-TTGTGAGCCACCATGTGGTT  48

seq1  GCTGGGAATTAAACTGAGGACCTCTGGAAGTGCCATCAGAGGTCTTAACC  100
      |||||||||| |||| |||||||||||||| || ||||| |  |||||||
seq2  GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCAGTGTACTTAACC  98

seq1  ACTGAGCTATCTCTCCAGCCC  121
       |||||| |||||||||||||
seq2  TCTGAGCCATCTCTCCAGCCC  119