BAC Information

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BAC

Clone NameB6Ng01-282N01
ChromosomeY (Build37)
Map Location 388,064 - 388,606
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y
Downstream geneTspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282N01.b
ACCGA081932
length766
definitionB6Ng01-282N01.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgggcagcttccaagaatacctgagggggagaaatggcgtct
accttagtaaaagtatttgcttcctgatttccatatgggcttagtggatg
tgggctgccatatggaaaactacaaatgatttggatttctgttgaactct
gttatatatttctttctacatttcttgctccctagtagccatcccagtac
cagccagtcttccgtttccactggaccctatttaaagtgaggcctctaat
atagtcaaaattttcacaggacaagtctcatcacttactgctattcatct
tgtccttaactcatcccatttcctactttttccttatagtctcttgatgt
ttatactcatttgtattactatgctaccaattcttggttggtgtgcctaa
ttcatactatatgtggatcagtcatctatggggatttatggtatctcttc
cagtactttatccagttcaattgctgggagtgggggggtattcagtgatt
taaatacactagtcctaggtcagccagcataatattggtgatggggctac
aaatgcctcagctcattgatgtaagtatgcatttgatccttatagagctg
cacctggttatctgggagagtgctagtctcagtgccactgaatctgggga
gtttttgtgatttgtcttactcatgctgacacctgtgactccttgaatcc
tcttggagtgaccagggaggtagaaagaaccctagagtttgctgcaagtc
aggggtggggaggttg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_388064_388606
seq2: B6Ng01-282N01.b_269_811 (reverse)

seq1  CAACCTCCCCACCCCTGACTTGCAGCAAACTCTAGGGTTCTTTCTACCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTCCCCACCCCTGACTTGCAGCAAACTCTAGGGTTCTTTCTACCTC  50

seq1  CCTGGTCACTCCAAGAGGATTCAAGGAGTCACAGGTGTCAGCATGAGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCACTCCAAGAGGATTCAAGGAGTCACAGGTGTCAGCATGAGTAA  100

seq1  GACAAATCACAAAAACTCCCCAGATTCAGTGGCACTGAGACTAGCACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATCACAAAAACTCCCCAGATTCAGTGGCACTGAGACTAGCACTCT  150

seq1  CCCAGATAACCAGGTGCAGCTCTATAAGGATCAAATGCATACTTACATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGATAACCAGGTGCAGCTCTATAAGGATCAAATGCATACTTACATCA  200

seq1  ATGAGCTGAGGCATTTGTAGCCCCATCACCAATATTATGCTGGCTGACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTGAGGCATTTGTAGCCCCATCACCAATATTATGCTGGCTGACCT  250

seq1  AGGACTAGTGTATTTAAATCACTGAATACCCCCCCACTCCCAGCAATTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTAGTGTATTTAAATCACTGAATACCCCCCCACTCCCAGCAATTGA  300

seq1  ACTGGATAAAGTACTGGAAGAGATACCATAAATCCCCATAGATGACTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATAAAGTACTGGAAGAGATACCATAAATCCCCATAGATGACTGAT  350

seq1  CCACATATAGTATGAATTAGGCACACCAACCAAGAATTGGTAGCATAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATATAGTATGAATTAGGCACACCAACCAAGAATTGGTAGCATAGTA  400

seq1  ATACAAATGAGTATAAACATCAAGAGACTATAAGGAAAAAGTAGGAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAATGAGTATAAACATCAAGAGACTATAAGGAAAAAGTAGGAAATG  450

seq1  GGATGAGTTAAGGACAAGATGAATAGCAGTAAGTGATGAGACTTGTCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAGTTAAGGACAAGATGAATAGCAGTAAGTGATGAGACTTGTCCTG  500

seq1  TGAAAATTTTGACTATATTAGAGGCCTCACTTTAAATAGGGTC  543
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATTTTGACTATATTAGAGGCCTCACTTTAAATAGGGTC  543