BAC Information

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BAC

Clone NameB6Ng01-301G23
ChromosomeY (Build37)
Map Location 949,547 - 950,238
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y
Downstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301G23.bB6Ng01-301G23.g
ACCGA095747GA095748
length1,124692
definitionB6Ng01-301G23.b B6Ng01-301G23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctgttttgaattttctttgacagttgtgtctatttcttcta
cagtatcttctacacctgagactctctcttatatctattgtattcttttg
gtaatacatctgcaattcatgatctctttactaggttttctatttccagg
tttgcctccatttgtgttttctttattgtttctatctccacttttaggtc
ttgggttgctttcttcacttcatttccccgtgtaccccgagttttcctgt
atttctgtcagtgagttattgatatcctccttaaaggactctattatatt
catgagataggatttaaaacagattccagatttttttttagtggcttgat
atattcagggcttgctgtagtggacgaggtatattctgatgatgcccatg
tattttggcttcctttgcttatggtcttgagcttgtcttcccatctggat
atgctaggtgtttgttggtctgaatggctatctggagtctgcctcttttg
tccctggtttgcttcaggtcttcagataggcctgtagcctggttatagca
gactatatgtggtgccttccaactgggggaatcttcacagagatagagaa
ggtgatgatctattgtgctagctgcagtagatctcctggggggtcttcag
cctgttgggtctacctacagtggagcagccaggctgttctccaactgctc
tgagtacagctgttccttgactgctgagttcaatgtatactcaactgctt
tctttgagtgcagtaggtcctctaggatgggtctgaatatagtgtcttta
tgggagtagactaactagggtgctgccctatcacagaagaccaggcagaa
gttgtggaagggacagaaggcagtggtatttaggagggcagaagttttgg
tgggtgatgtgttccaagtccaccagtctcaggagcagctcaggactggg
gggtgggggagggcattttaccaactgtcacaagtatagcatggtcctct
aaaatggaaatggatatggtatcttcgaagggcaaaggcccactaggatc
tgctcgtcagaatagccggactcaaggcctgattttatacggaagccaat
catagcatagaatggtagaaagat
gaattccttgtagtgtgtgactagatctaggtccagtggggtgcaactga
tggtctgctccatggtaagttctcaagaaaataaacatgaacaaataaaa
cacaaacacagaaacatggaaacaagtcttcagaggtccagaaaaaaacc
aaaggaatcctatggcagctatccaaaaatgtgctctgccaatcagaagg
gtacctccagtccccagcaaagcttgttctctgactccaactgcaagtag
ttcaaaaaagcagcctatccctggagtaggttctgcactttagataaata
agccacaggtctattctatggtcgagtgggcacccactttgctattctct
ttctctgatccatacacagttgaaacacaatataatatttaaaacttcca
aacctttttattttattcttcaggaaactatcagtttctctggctgctcc
cagaaccatgtgcctagggttagtataattcacaaaaagatgcaaattta
taaatcagaaataattaataggaagaaaaaagagagaaaggaaggaaggg
aggaaggaagggaggaaggaaggaaggagctctacatcctttgcctacag
atcaatatgatggatgtttttctcaacttaagtcccctttttctatgtag
ctgaatcaggttgacaaattttgcatagatacaagagaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_949547_950238
seq2: B6Ng01-301G23.g_66_757

seq1  GAATTCCTTGTAGTGTGTGACTAGATCTAGGTCCAGTGGGGTGCAACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTAGTGTGTGACTAGATCTAGGTCCAGTGGGGTGCAACTGA  50

seq1  TGGTCTGCTCCATGGTAAGTTCTCAAGAAAATAAACATGAACAAATAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGCTCCATGGTAAGTTCTCAAGAAAATAAACATGAACAAATAAAA  100

seq1  CACAAACACAGAAACATGGAAACAAGTCTTCAGAGGTCCAGAAAAAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACACAGAAACATGGAAACAAGTCTTCAGAGGTCCAGAAAAAAACC  150

seq1  AAAGGAATCCTATGGCAGCTATCCAAAAATGTGCTCTGCCAATCAGAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAATCCTATGGCAGCTATCCAAAAATGTGCTCTGCCAATCAGAAGG  200

seq1  GTACCTCCAGTCCCCAGCAAAGCTTGTTCTCTGACTCCAACTGCAAGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTCCAGTCCCCAGCAAAGCTTGTTCTCTGACTCCAACTGCAAGTAG  250

seq1  TTCAAAAAAGCAGCCTATCCCTGGAGTAGGTTCTGCACTTTAGATAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAAAGCAGCCTATCCCTGGAGTAGGTTCTGCACTTTAGATAAATA  300

seq1  AGCCACAGGTCTATTCTATGGTCGAGTGGGCACCCACTTTGCTATTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACAGGTCTATTCTATGGTCGAGTGGGCACCCACTTTGCTATTCTCT  350

seq1  TTCTCTGATCCATACACAGTTGAAACACAATATAATATTTAAAACTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGATCCATACACAGTTGAAACACAATATAATATTTAAAACTTCCA  400

seq1  AACCTTTTTATTTTATTCTTCAGGAAACTATCAGTTTCTCTGGCTGCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTTTATTTTATTCTTCAGGAAACTATCAGTTTCTCTGGCTGCTCC  450

seq1  CAGAACCATGTGCCTAGGGTTAGTATAATTCACAAAAAGATGCAAATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCATGTGCCTAGGGTTAGTATAATTCACAAAAAGATGCAAATTTA  500

seq1  TAAATCAGAAATAATTAATAGGAAGAAAAAAGAGAGAAAGGAAGGAAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAGAAATAATTAATAGGAAGAAAAAAGAGAGAAAGGAAGGAAGGG  550

seq1  AGGAAGGAAGGGAGGAAGGAAGGAAGGAGCTCTACATCC-TTGCCTACAG  599
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGGAAGGAAGGGAGGAAGGAAGGAAGGAGCTCTACATCCTTTGCCTACAG  600

seq1  ATCAATATGATGGATGTTTTTTCTCAACTTAAGTCCCCTTTTTCTATGTA  649
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATCAATATGATGGATG-TTTTTCTCAACTTAAGTCCCCTTTTTCTATGTA  649

seq1  GCTGAATCAGGTTGACAAAATTTGCACAGATACAAGAGAGGAA  692
      ||||||||||||||||||| |||||| ||||||||||||||||
seq2  GCTGAATCAGGTTGACAAATTTTGCATAGATACAAGAGAGGAA  692