Query= MSMg01no268_p01.b1 MSMg01no268_p01.b1 CHROMAT_FILE:
MSMg01no268_p01.b1 PHD_FILE: MSMg01no268_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:18 2005
(345 letters)
>mm_chrY_388960_389704
Length = 745
Score = 659 bits (341), Expect = 0.0
Identities = 344/345 (99%)
Strand = Plus / Plus
Query: 1 gctatgggggacttttggtatagcattggaaatgtaaatgagctaaatacctaattaaga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 gctatgggggacttttggtatagcattggaaatgtaaatgagctaaatacctaattaaaa 260
Query: 61 atagaaaaaaaaagaatcaatactgacagtaccttttactagtattgatgtgaagaacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagaaaaaaaaagaatcaatactgacagtaccttttactagtattgatgtgaagaacta 320
Query: 121 gactgaaaataacaatatgaagagctgtcatcaatattcctgctcaagaaaagaacctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gactgaaaataacaatatgaagagctgtcatcaatattcctgctcaagaaaagaacctac 380
Query: 181 atgctaaaagactgacatgctaggcaaagatgtgcatgtattacaataatggattgcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgctaaaagactgacatgctaggcaaagatgtgcatgtattacaataatggattgcctt 440
Query: 241 tgaataaaatttaaggcctgctccaaaagaggcgagttcacatctagtatcaggacaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaataaaatttaaggcctgctccaaaagaggcgagttcacatctagtatcaggacaaaa 500
Query: 301 acctgtagagatttttgatcccaatgtggaagcaacttctttttt 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acctgtagagatttttgatcccaatgtggaagcaacttctttttt 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_p01.g1 MSMg01no268_p01.g1 CHROMAT_FILE:
MSMg01no268_p01.g1 PHD_FILE: MSMg01no268_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:18 2005
(648 letters)
>mm_chrY_503383_504430
Length = 1048
Score = 1021 bits (528), Expect = 0.0
Identities = 531/532 (99%)
Strand = Plus / Minus
Query: 1 agagttgtgagccatgataattgtgttgggagttgaacctaggtactacagaggagcagc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 532 agagttgtgagccatgataattgtgttgggagttgaacctaggtactaaagaggagcagc 473
Query: 61 cagtccttttaacggagccttctctccagcttctgtacttatttttattatatggtaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cagtccttttaacggagccttctctccagcttctgtacttatttttattatatggtaatt 413
Query: 121 accacaattttgaggcagtttaatgaattttttaatttgacactaatgccttaaaatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 accacaattttgaggcagtttaatgaattttttaatttgacactaatgccttaaaatata 353
Query: 181 aattgaaattcttctactacacaatagaaaaaggcctgtccattgctttttttaaaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aattgaaattcttctactacacaatagaaaaaggcctgtccattgctttttttaaaagat 293
Query: 241 tatttttactttatgtgcatttgagattcctcactatatatctgtatatgaacagcatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tatttttactttatgtgcatttgagattcctcactatatatctgtatatgaacagcatgc 233
Query: 301 ttagtttccgtgtaggctagaataaggcattggttcccctagaactggagtttcatatcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 ttagtttccgtgtaggctagaataaggcattggttcccctagaactggagtttcatatcg 173
Query: 361 tcatgagctgccacatggttgcttggaattggattctggtcctctagaagagcagaccat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 tcatgagctgccacatggttgcttggaattggattctggtcctctagaagagcagaccat 113
Query: 421 gctattacgtttgagatatttatccatctctaaatttctgattaataatacaaaatattc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 gctattacgtttgagatatttatccatctctaaatttctgattaataatacaaaatattc 53
Query: 481 aggtgtttttcttgactgtcaacggaagttttctgtaaaaccttttcctatt 532
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 aggtgtttttcttgactgtcaacggaagttttctgtaaaaccttttcctatt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
