Query= MSMg01no366_h16.b1 MSMg01no366_h16.b1 CHROMAT_FILE:
MSMg01no366_h16.b1 PHD_FILE: MSMg01no366_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:20 2005
(511 letters)
>mm_chrX_120313185_120314093
Length = 909
Score = 474 bits (245), Expect = e-138
Identities = 301/321 (93%), Gaps = 6/321 (1%)
Strand = Plus / Minus
Query: 1 aatttggggcacctgtgaggaa--ttttttttcctgatttgattatgtgaaataggaaga 58
|||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 485 aatttggggcacctgtgaggaattttttttttcctgatttgattatgtgagataggaaga 426
Query: 59 ccaaccccaaatgtagatcgtttgttctgttgtagaaacaactgtaaaatataaatttca 118
||||||||||||||||||||||||||||||| ||||||| ||| || |||||| ||||||
Sbjct: 425 ccaaccccaaatgtagatcgtttgttctgttatagaaacgactctacaatatacatttca 366
Query: 119 ttgatg-tcagttttttttaataaaagtgtgtagctaggactaaattctagtagttacaa 177
|||||| | || ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 365 ttgatgct-ag--ttttttaataaaagtgtgtagctaggactaaattctagtagtttcaa 309
Query: 178 tcaagatagtttttatgatcctacactgtttctgtcttttattacagtgtttcctgaaca 237
||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct: 308 tcaagatcgtttttatgatcttacactgtttctgtcttttattacagtgttccctgagca 249
Query: 238 ctgaggtggagatttgatggtgacctcccttttaggactgaatgttagaaggtccctcag 297
|||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 248 ctgagggggagatttgatggtgacctcccttgtgggactgaatgttagaaggtccctcag 189
Query: 298 gctttgcatattatctggctg 318
|||||||||||||||||||||
Sbjct: 188 gctttgcatattatctggctg 168
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 909
Length adjustment: 10
Effective length of query: 501
Effective length of database: 899
Effective search space: 450399
Effective search space used: 450399
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_h16.g1 MSMg01no366_h16.g1 CHROMAT_FILE:
MSMg01no366_h16.g1 PHD_FILE: MSMg01no366_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:20 2005
(523 letters)
>mm_chrY_1792095_1793017
Length = 923
Score = 594 bits (307), Expect = e-174
Identities = 388/417 (93%), Gaps = 11/417 (2%)
Strand = Plus / Minus
Query: 1 tggtccagaataattgagacagcaggtcctcctaaagggatactctcctcttcagcctcc 60
|||||| |||||||| ||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 715 tggtcctgaataattaagacagcaggtcctcctaaagggataccctcctcttaagcctcc 656
Query: 61 ttcagtctttctccaattc-cccaatggttcagcagattctgtccattggttggttgcag 119
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ttcagtctttctccaattcacccaatggttcagcagattctgtccattggttggttgcag 596
Query: 120 acatatgcatctgattgtttcaactgctcattaggtcttcagaagtgcattcatgctagt 179
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 595 acatatgcatctgattgtttcaactgctcattaggtctgcagaagtgcattcatgctagt 536
Query: 180 attcacattacaattatgtgaattcagaagcca-gcaga-gttcgtggactgcaagcagg 237
||||||||||||||||||||||||||| || || ||||| ||| | ||||||||||||||
Sbjct: 535 attcacattacaattatgtgaattcaggag-cacgcagaggtt-gcggactgcaagcagg 478
Query: 238 tcttctgaaaaagcaatgcatgatataattacctgaattttctggcagtgctcttcaata 297
||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 477 tcttctgcaaaggcaatgcatgatataattacctgaattttctgtcagtgctcttcaata 418
Query: 298 ttgtgttctacgtgatgcaatattccactctctttctctatctctgtctctgtctctgtc 357
|||| ||||||||||||||||||||| |||||||||||| |||||||| | ||||||||
Sbjct: 417 ttgtattctacgtgatgcaatattcctctctctttctct--ctctgtctgtctctctgtc 360
Query: 358 cctctctgtctctgtctctctctgtctctttgtctct--ctctctctgtctctctgt 412
||||| |||||||||||||||||||| ||||||| |||||||| |||||||||
Sbjct: 359 tgtctct--ctctgtctctctctgtctctctgtctctgtctctctctctctctctgt 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
