MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-386D05
Chromosome	Y (Build37)
Map Location	2,890,685 - 2,890,895
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
Downstream gene	none
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ube1y1-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22203 MGI:98892
definition	gene_synonym : A1s9Y-2; Sby; Ube-3; Ube1y-1ps1; Ube1y-2 note : ubiquitin-activating enzyme E1, Chr Y, pseudogene 1 pseudo : _no_value

name	Sry (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21674 MGI:98660
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042840 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042840
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	LOC100042849 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042849
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 4 ESTs, 14 Proteins

name	LOC620228 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620228
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 42 Proteins pseudo : _no_value

name	LOC667181 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667181
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	Rbmy1a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19657 MGI:104732
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667189 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667189
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	LOC100042874 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042874
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 4 ESTs, 15 Proteins

name	LOC667194 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667194
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	LOC100042881 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042881
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 4 ESTs, 15 Proteins

name	LOC667201 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667201
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	LOC100039546 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039546
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins pseudo : _no_value

name	Rhoay-ps2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11850 MGI:1314636
definition	gene_synonym : Arhay-ps2; RhoAy2 note : ras homolog A translocated to the Y, pseudogene 2 pseudo : _no_value

name	LOC100039568 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039568
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	LOC100041505 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041505
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 4 ESTs, 14 Proteins

name	LOC100039581 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039581
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 42 Proteins pseudo : _no_value

name	LOC676356 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676356
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC667217 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667217
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 Proteins pseudo : _no_value

name	LOC100039613 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039613
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100041537 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041537
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 68 ESTs, 1 Protein

name	LOC667227 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC667236 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667236
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG631479 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:631479 MGI:3647310
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC667244 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC100039652 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039652
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 27 Proteins pseudo : _no_value

name	Sry (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755760 GeneID:21674 MGI:98660
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sex determining region of Chr Y transcript_id : NM_011564.1

name	LOC100042840 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272590 GeneID:100042840
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : similar to histone variant H2al2 transcript_id : XM_001478281.1

name	LOC100042849 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272594 GeneID:100042849
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 14 Proteins product : similar to RNA-binding protein, transcript variant 2 transcript_id : XM_001478307.1

name	LOC100042849 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272592 GeneID:100042849
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 14 Proteins product : similar to RNA-binding protein, transcript variant 1 transcript_id : XM_001478293.1

name	Rbmy1a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755297 GeneID:19657 MGI:104732
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein, Y chromosome, family 1, member A1 transcript_id : NM_011253.1

name	LOC100042874 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272598 GeneID:100042874
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 15 Proteins product : similar to RNA-binding protein, transcript variant 2 transcript_id : XM_001478346.1

name	LOC100042874 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272596 GeneID:100042874
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 15 Proteins product : similar to RNA-binding protein, transcript variant 1 transcript_id : XM_001478333.1

name	LOC100042881 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272602 GeneID:100042881
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 15 Proteins product : similar to RNA-binding protein, transcript variant 2 transcript_id : XM_001478368.1

name	LOC100042881 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272600 GeneID:100042881
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 15 Proteins product : similar to RNA-binding protein, transcript variant 1 transcript_id : XM_001478356.1

name	LOC100041505 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272611 GeneID:100041505
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 14 Proteins product : similar to Rbm, transcript variant 2 transcript_id : XM_001475806.1

name	LOC100041505 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272609 GeneID:100041505
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 14 Proteins product : similar to Rbm, transcript variant 1 transcript_id : XM_001475789.1

name	LOC100041537 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272613 GeneID:100041537
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 68 ESTs, 1 Protein product : hypothetical protein LOC100041537 transcript_id : XM_001475826.1

name	Sry (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755761 CCDS:CCDS30545.1 GeneID:21674 MGI:98660
definition	GO_function : GO:0008301 - DNA bending activity [Evidence IDA]; GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0030238 - male sex determination [Evidence IGI]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 function : sexual differentiation note : testis determining-Y product : sex determining region Y protein_id : NP_035694.1

name	LOC100042840 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272591 GeneID:100042840
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478331.1

name	LOC100042849 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272593 GeneID:100042849
definition	codon_start : 1 product : similar to RNA-binding protein isoform 1 protein_id : XP_001478343.1

name	LOC100042849 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272595 GeneID:100042849
definition	codon_start : 1 product : similar to RNA-binding protein isoform 2 protein_id : XP_001478357.1

name	Rbmy1a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755298 CCDS:CCDS30546.1 GeneID:19657 MGI:104732
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : RNA binding motif protein, Y chromosome, family 1, member A1 protein_id : NP_035383.1

name	LOC100042874 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272597 GeneID:100042874
definition	codon_start : 1 product : similar to RNA-binding protein isoform 1 protein_id : XP_001478383.1

name	LOC100042874 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272599 GeneID:100042874
definition	codon_start : 1 product : similar to RNA-binding protein isoform 2 protein_id : XP_001478396.1

name	LOC100042881 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272601 GeneID:100042881
definition	codon_start : 1 product : similar to RNA-binding protein isoform 1 protein_id : XP_001478406.1

name	LOC100042881 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272603 GeneID:100042881
definition	codon_start : 1 product : similar to RNA-binding protein isoform 2 protein_id : XP_001478418.1

name	LOC100041505 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272610 GeneID:100041505
definition	codon_start : 1 product : similar to Rbm isoform 1 protein_id : XP_001475839.1

name	LOC100041505 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272612 GeneID:100041505
definition	codon_start : 1 product : similar to Rbm isoform 2 protein_id : XP_001475856.1

name	LOC100041537 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272614 GeneID:100041537
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475876.1

name	LOC620228 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620228
definition	number : 1 pseudo : _no_value

name	LOC100039581 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039581
definition	number : 1 pseudo : _no_value

name	LOC676356 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676356
definition	number : 13 pseudo : _no_value

name	LOC676356 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676356
definition	number : 12 pseudo : _no_value

name	LOC676356 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676356
definition	number : 11 pseudo : _no_value

name	LOC676356 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676356
definition	number : 10 pseudo : _no_value

name	LOC676356 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676356
definition	number : 9 pseudo : _no_value

name	LOC676356 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676356
definition	number : 8 pseudo : _no_value

name	LOC676356 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676356
definition	number : 7 pseudo : _no_value

name	LOC676356 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676356
definition	number : 6 pseudo : _no_value

name	LOC676356 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676356
definition	number : 5 pseudo : _no_value

name	LOC676356 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676356
definition	number : 4 pseudo : _no_value

name	LOC676356 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676356
definition	number : 3 pseudo : _no_value

name	LOC676356 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676356
definition	number : 2 pseudo : _no_value

name	LOC676356 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676356
definition	number : 1 pseudo : _no_value

name	LOC667217 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667217
definition	number : 1 pseudo : _no_value

name	LOC667217 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667217
definition	number : 2 pseudo : _no_value

name	LOC667217 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667217
definition	number : 3 pseudo : _no_value

name	LOC667217 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667217
definition	number : 4 pseudo : _no_value

name	LOC100039613 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039613
definition	number : 1 pseudo : _no_value

name	LOC667227 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667227
definition	number : 2 pseudo : _no_value

name	LOC667227 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667227
definition	number : 1 pseudo : _no_value

name	LOC667236 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667236
definition	number : 1 pseudo : _no_value

name	LOC667236 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667236
definition	number : 2 pseudo : _no_value

name	LOC667236 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667236
definition	number : 3 pseudo : _no_value

name	LOC667236 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667236
definition	number : 4 pseudo : _no_value

name	EG631479 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:631479
definition	number : 1 pseudo : _no_value

name	LOC667244 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667244
definition	number : 1 pseudo : _no_value

name	LOC667244 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667244
definition	number : 2 pseudo : _no_value

name	LOC667244 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667244
definition	number : 3 pseudo : _no_value

name	LOC667244 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667244
definition	number : 4 pseudo : _no_value

name	LOC667244 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667244
definition	number : 5 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:271445
definition	standard_name : PMC15951P1

name	(CDS detail)
type	STS
link
xref	UniSTS:162400
definition	standard_name : RH125586

name	(CDS detail)
type	STS
link
xref	UniSTS:144595
definition	standard_name : Sry

name	(CDS detail)
type	STS
link
xref	UniSTS:485004
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:274188
definition	standard_name : Sry

name	(CDS detail)
type	STS
link
xref	UniSTS:270599
definition	standard_name : PMC129753P1

name	(CDS detail)
type	STS
link
xref	UniSTS:239199
definition	standard_name : Sry

name	(CDS detail)
type	STS
link
xref	UniSTS:239198
definition	standard_name : Sry

name	(CDS detail)
type	STS
link
xref	UniSTS:144594
definition	standard_name : Sry

name	(CDS detail)
type	STS
link
xref	UniSTS:144593
definition	standard_name : Sry

name	(CDS detail)
type	STS
link
xref	UniSTS:144792
definition	standard_name : PMC303371P2

name	(CDS detail)
type	STS
link
xref	UniSTS:256898
definition	standard_name : Sry

name	(CDS detail)
type	STS
link
xref	UniSTS:466048
definition	standard_name : Sry

name	(CDS detail)
type	STS
link
xref	UniSTS:466049
definition	standard_name : Sry

name	(CDS detail)
type	STS
link
xref	UniSTS:466050
definition	standard_name : Sry

name	(CDS detail)
type	STS
link
xref	UniSTS:265090
definition	standard_name : Sry

name	(CDS detail)
type	STS
link
xref	UniSTS:271128
definition	standard_name : PMC150978P1

name	(CDS detail)
type	STS
link
xref	UniSTS:144591
definition	standard_name : Sry

name	(CDS detail)
type	STS
link
xref	UniSTS:256632
definition	standard_name : Sry

name	(CDS detail)
type	STS
link
xref	UniSTS:465409
definition	standard_name : Sry

name	(CDS detail)
type	STS
link
xref	UniSTS:272519
definition	standard_name : PMC303372P2

name	(CDS detail)
type	STS
link
xref	UniSTS:144592
definition	standard_name : Sry

name	(CDS detail)
type	STS
link
xref	UniSTS:464694
definition	standard_name : Sry

name	(CDS detail)
type	STS
link
xref	UniSTS:162400
definition	standard_name : RH125586

name	(CDS detail)
type	STS
link
xref	UniSTS:271445
definition	standard_name : PMC15951P1

name	(CDS detail)
type	STS
link
xref	UniSTS:224709
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:105081
definition	standard_name : G42064

name	LOC667181 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272582 GeneID:667181
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to Expressed sequence AU019823 pseudo : _no_value transcript_id : XR_030974.1

name	LOC667189 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272583 GeneID:667189
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to Expressed sequence AU019823 pseudo : _no_value transcript_id : XR_035660.1

name	LOC667194 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272584 GeneID:667194
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to Expressed sequence AU019823 pseudo : _no_value transcript_id : XR_030995.1

name	LOC667201 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272585 GeneID:667201
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to Expressed sequence AU019823 pseudo : _no_value transcript_id : XR_035661.1

name	LOC100039546 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272586 GeneID:100039546
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : similar to RNA-binding protein pseudo : _no_value transcript_id : XR_031019.1

name	LOC100039568 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272607 GeneID:100039568
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to Expressed sequence AU019823 pseudo : _no_value transcript_id : XR_031042.1

name	LOC100039652 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272608 GeneID:100039652
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 27 Proteins product : similar to MGC107098 protein pseudo : _no_value transcript_id : XR_031120.1

clone name	MSMg01-506I13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-320C16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-119D11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-084E04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-481F09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-331L23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-353M20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-106I22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-332K06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-080P11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-119E12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-148B24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-185M08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-216O07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-231O05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-261C17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-303H03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-313N04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-329G15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-345B21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-372E09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-380J11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-400E01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-471L12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-505E02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-511I20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-534N03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542M10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-543L08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-215P16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-330O08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-102L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182P09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-165P06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-184E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233N24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-180A18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-330J07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-233I09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-180K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447A18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-414J04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-136K01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-491E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529H04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-138H17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-199D07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-334O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149J17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-149J21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-142J05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-277O16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-278H18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-112D02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-390H19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-469F12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-349M20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-177H20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-100H08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-114C01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-154O09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-395F16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-445G14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-122D15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-116H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411N05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-113P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316D20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-495B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371C06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-511L11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-390I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302O01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-205J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185D14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-233H05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-217C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290B02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-445H09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-395P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503E23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-067N16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-074M07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-347I03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-522F06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-199E24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-350J11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-391E01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-052J24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-128P13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-144N09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-199L20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-316D05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-351H11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-415P23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-449A06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-489C09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-497N17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-543A04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-546O12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-500B24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-514H13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-154C20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-114J09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-464F18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-178A18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-177J21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-103G06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-117C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143L11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-065E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060B09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-343K14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-389A18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-472M06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-480F21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-527D21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-533L02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-146G14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-500B24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-545E10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-546P19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-332N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384O06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-446G09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-176G16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-350I13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-299G22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-482M01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-418C24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-069A09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-068B13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-474G14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-136K04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-269F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485L22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-392P12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-444I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331C12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-131C04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-424L12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-301D04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-315P06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-372A19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-482A17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-499H10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-302D22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-499E05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-083B17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-360F08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-361I19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-424J06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-060N18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-179B22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-434O19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-453M13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-471P11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-536E04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-541L20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-071C19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-453M13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-469G04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-493H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516F20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-157M24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-204N21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-293G18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-301G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358N02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-526L01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-111G13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-139P12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-275I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311N18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-315L11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-326P21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-386D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391L15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-404O24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-482A17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-491J08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-494J03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-495H12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-533H06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-535J05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-536G01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-489L19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-501B06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-097F16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-475B09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-390O07
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-073M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099I06
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-386D05.T7 (MSMg01no386_d05.b1)	MSMg01-386D05.TJ (MSMg01no386_d05.g1)
ACC	AG489223	AG489224
length	730	741
length of high quality (start - end)	689 (42 - 730)	249 (75 - 323)
definition	CHROMAT_FILE: MSMg01no386_d05.b1 PHD_FILE: MSMg01no386_d05.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:28:58 2005	CHROMAT_FILE: MSMg01no386_d05.g1 PHD_FILE: MSMg01no386_d05.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:28:58 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGA ATTCCAAACTATTCTCTATCTGATGGAGGGCAAAAATTTCCATTTAACTG TGTCTCACATCGAACTCCTCATTTGAAAGTGGCACCAGAATGACTCTTTT TGTTCCAGTGGTTCTCAAATTCACATCCTCTTTCGAAGAGGTCTATAAAT GTCATTCAGTCATACCAGGGCTTCAGTGCCTCTCCCTCTCCCTATGGGAG CCTCAGACACACCACATCTAGTCATAAATATTTCCTCTTCTCCCTGTGTC TATTGGGCAACAAAGCCTTCTCGAATGCCCATATTGGACTGAAATATTTC CTTTTTTTTTCAGTGGTGGACACATACCTACCCTCTCTTGTAAAGTGTAA ATAGATCTTGTCTTATTGACTATGTGTGCCTGCTATATTACAACTGTCTA AGATTACTTCCAAACTTCTTCCTGTTACAAATATTCGGAGACATTCCTCC ATTCAAGAAAAGTGGCCTTGCTCTTATGTCATCTGACTAAAGGTTTCATA GACCAAAGATAACCATCCAACCTGTTGGAATACTGAAACAATTGCTGCCT GCTTTCGACACACTACATAAAATATGTGGATATCCTAAATTCTACAAAAA AGATTTGTAAGCAGATCAAGCAATACTGGGACTCCCTCTTCTCCAGAAGG TATTTGCATTTTCACCAATGTGAAATGGAN	CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXCAGAAATTCACTATTCTCAGTTTGCAGTTGTAA ATACTCGTGAGAGCAACGAACTCCCTTTTTCAGATGGAAAAGAGTTACTG ACAGACATGTAAGGAGAAACCGGCTGCCACCCTGTGGGAAATCCCAGGAG TTCTGAGTGAGTCCACCCTGTGGGACATCCCAGGAGTTCTGAGTGAGTTC CAGGGATACCTGGAGATCTCCTATCAGGGTGCCAAGTGAGAGTATGCTCA CTTGCCTGTCTGTTTCTGTTACTGTTTTTCTCTAAGTGAGTGTGTGCTCT CTCGGCCATCTTATTGGGGCCTGGTCTTGGTTATTGTAATCTTTTTGTGT GTATATATTGTTTTTTTTTCCCTCCACGTGACTCTGATGATGGGACCGAC TATTAGCATGCCCCTTGGACTGACCCATGATCACTGGACTGAAAGTAAGA CTAACACTCACATTCTCTCTGTGGATGTCTGAAATAGATTTTAGAGAACT TTCTGCTCTACAGAATGGCCAGCTTTGATGATAGCTGGCCACTAGAGGGC ACTCATTGTTTGGTTCTGTTTTCAGTTCCTTAAAGTTGTCTTACAGAGGG GTATCTCGGTCTTAGCCTTATTTTGTGCCCTACATTCCTCTTCTATAAAA ATTTATATCGATATCCCCCCTCTCCTCCCTTCTTGCTTTAA
quality values	Open. Hide. 8 8 8 8 8 9 13 37 37 37 30 30 25 22 23 30 23 23 25 28 28 28 43 48 30 30 31 31 25 22 25 15 16 14 17 13 11 9 8 8 8 8 19 19 25 59 47 47 31 31 36 36 36 36 36 36 36 42 57 57 43 30 37 32 32 30 30 30 40 40 48 48 48 48 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 59 59 57 68 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 50 43 43 39 43 43 43 43 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 46 44 39 57 57 59 68 68 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 59 59 59 59 59 59 57 59 59 59 57 57 57 57 57 59 59 59 59 59 59 59 59 59 47 34 33 21 28 14 15 15 28 23 33 36 47 47 59 59 59 48 57 57 57 48 48 48 47 47 47 47 47 50 57 57 50 53 53 57 57 57 57 57 57 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 57 57 57 57 57 48 48 48 57 57 57 48 48 48 59 59 59 57 57 53 53 53 44 43 43 43 43 43 47 59 59 59 37 37 37 31 31 37 59 59 59 59 50 50 50 48 48 48 59 59 57 57 57 57 53 44 44 43 43 43 43 43 59 59 57 48 48 42 42 32 32 35 47 40 43 39 37 37 37 33 33 28 37 37 48 33 33 33 33 33 30 47 43 41 32 32 37 34 39 39 41 41 42 46 46 48 48 48 48 48 48 37 36 28 30 30 37 40 48 47 47 47 47 47 57 47 43 37 39 37 39 39 37 37 41 41 41 37 37 37 36 35 39 37 37 30 30 28 33 33 33 37 37 39 30 31 28 34 30 31 31 37 32 33 31 31 31 32 41 36 30 32 27 24 24 27 32 30 31 30 34 34 25 25 25 34 34 28 28 28 37 34 40 39 41 41 34 30 16 18 18 24 24 33 39 37 37 28 23 20 24 23 18 16 24 24 29 31 24 22 20 17 20 22 29 30 31 37 37 37 26 23 13 13 10 15 14 28 30 25 30 31 25 29 29 17 8 8 3 0	Open. Hide. 8 13 13 10 8 8 6 8 13 16 30 32 36 37 37 37 37 32 37 39 39 41 42 50 50 50 42 41 25 25 11 6 6 6 6 6 6 6 6 6 6 6 8 9 13 12 19 34 34 37 37 41 41 41 41 39 37 37 37 23 23 9 9 9 9 8 8 7 7 7 9 12 21 21 21 22 22 33 33 50 50 53 53 53 53 53 53 53 59 57 57 57 57 57 57 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 51 51 51 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 57 57 57 57 57 57 57 68 68 68 68 68 68 50 51 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 47 47 54 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 57 57 57 57 57 57 59 59 59 59 59 68 68 68 68 68 53 53 53 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 41 41 23 19 9 10 9 14 12 20 8 8 8 8 8 8 10 10 26 34 43 50 50 59 59 59 50 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 48 43 43 43 43 43 43 43 42 28 28 20 31 30 22 17 20 27 37 42 42 35 35 59 59 68 68 68 68 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 53 57 48 48 48 59 59 59 59 59 59 29 33 11 11 11 15 11 11 12 12 19 28 34 47 48 48 48 48 48 40 41 39 39 35 37 31 28 28 40 39 41 41 41 39 47 35 35 35 39 39 57 32 34 28 28 25 32 26 36 43 43 48 57 47 40 29 28 28 28 37 33 37 33 33 43 46 43 47 43 47 43 47 43 43 43 43 32 34 18 18 14 21 21 30 30 40 30 24 29 23 26 33 43 59 59 57 57 57 57 30 28 14 14 14 26 17 30 24 30 39 28 28 18 9 10 15 10 8 9 21 28 32 37 30 30 32 39 24 24 23 22 16 16 19 15 14 23 23 29 26 26 14 14 13 16 15 10 9 9 9 9 10 15 15 22 22 15 19 19 13 13 8 8 8 8 8 12 11 11 11 11 11 11 18 11 11 11 15 12 28 13 13 13 16 11 18 12 10 10 8 8 12 16 28 28 28 21 20 14 14 18 19 26 24 15 15 17 18 24 24 24 32 29 15 15 12 18 11 9 9 9 8 13 8 8 10 9 12 13 10 9 11 11 14 14 12 9 9 14 13 13 10 10 10 9 8 8 8 8 8 10 10 12 10 12 8 8 6 6 13 15 15 10 10 8 8 8 8 8 8 8 8 11 8 8 8 10 8 13 10 9 8 10 8 8 10 10 10 8 8 8 8 8 10 11 11 11 11 11 11 10 10 10 15 13 17 17 10 10 8 10 7 9 9 13 11 10 11 9 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no386_d05.g1 MSMg01no386_d05.g1 CHROMAT_FILE:
MSMg01no386_d05.g1 PHD_FILE: MSMg01no386_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:58 2005
         (249 letters)



>mm_chrY_2890447_2891095
          Length = 649

 Score =  199 bits (103), Expect = 1e-55
 Identities = 194/247 (78%), Gaps = 36/247 (14%)
 Strand = Plus / Plus

                                                                       
Query: 3   actattctcagtttgcagttgtaaatactcgtgagagcaacgaactccctttttcagatg 62
           ||||||||| |||| |||||||| || ||||||||||||||||| ||||| |  ||||||
Sbjct: 239 actattctcggtttacagttgtacatgctcgtgagagcaacgaaatccctctcccagatg 298

                                                                       
Query: 63  gaaaagagttactgacagacatgtaaggagaaaccggctgccaccctgtgggaaatccca 122
           ||| || ||||||||||||||||| |||||||||||||||                 |||
Sbjct: 299 gaagagggttactgacagacatgtgaggagaaaccggctg-----------------cca 341

                                                                       
Query: 123 ggagttctgagtgagtccaccctgtgggacatcccaggagttctgagtgagttccaggga 182
           |                   ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 342 g-------------------cctgtgggacatcccaggagttctgagggagttccaggga 382

                                                                       
Query: 183 tacctggagatctcctatcagggtgccaagtgagagtatgctcacttgcctgtctgtttc 242
           |||||||||||||||||||||||||||||| |||||| |||||||| |  ||||||||||
Sbjct: 383 tacctggagatctcctatcagggtgccaagagagagtgtgctcactcggttgtctgtttc 442

                  
Query: 243 tgttact 249
           |||||||
Sbjct: 443 tgttact 449


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space:   153600
Effective search space used:   153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information