BAC Information

Click to search

BAC

Clone NameB6Ng01-003H11
Chromosome3 (Build37)
Map Location 3,220,485 - 3,221,014
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC667655, LOC100039140, Hnf4g, EG383815, LOC100039157, LOC100039167, LOC667709
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003H11.bB6Ng01-003H11.g
ACCDH841168DH841169
length799828
definitionDH841168|Mus musculus domesticus DNA, BAC clone: B6Ng01-003H11, 5' end.DH841169|Mus musculus domesticus DNA, BAC clone: B6Ng01-003H11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagatacagggcaacaggaaaatcaggaggagcaccaatgagg
atccaatattgatggtgtcacagaagacagaggtctcaaaccagatcaat
gactcatcataatgatcatttgcaagtgaaaatgtgtaaacagagagaca
gtgtggaacacagtgacacactacagcttccaggatgagatagtatctag
gctttgcttttgttattgttttttgattgattgattgattgtgtgtgtgt
gtgtgtgtgtgtatatgctaacagaaacaatttttgaaatcagatatctg
ttcccttgcaaaaccctccctgttctttctaccaagtccaatagaatcat
tatccccttgccttgagcctaacatgcaccgcctcttattgttccatgcc
tcagattgcctagaaatctgccaacagaccctaacttacctgactctgcc
tggcaggcagacttttctctcccccactcccccccatgcttcagagaagt
ggcaaatggctcctgacagagaaataagcagataggacatcagcaatgga
aggaatgattctatccaaaactgtcttggtgaaccaatgtcttcactaga
gtcatttataggattgcggcagataggtgtacaggagtacagtaaggggt
gacttagaggagcatcaatgatggattacatgagcttgggtgtaaaggag
ctacatcactgaaaaaccccacccagcatgataacaaattcatggtgtcc
caacacctgaccaattttcctacttccctgtggcttatggtagtggagg
gaattcccaatgtctgagaagcacttaaagaaaatgttcaacattcttag
tcatcagggaatgcaaaactaaatgactcaaataagaatgagtttgcacc
ttacacataccagaatggctaagatcaaaattcaaaggatagcactgcca
gggatgttgtggagcaatgggaatgttctttcattgctgacgagagtgta
aatttgtacagctactctgcaaatcaatttggtgatttttcacaagattg
aattagttctacctgaagacccagctataccactccttgatatatatata
caaaagaccctccaacattccccaaagacacttgttcacctatgttcata
taaactttatttgtgatagatagaaattggaaacaatctagatgtgtttc
aactgcagaatggatacagaaaatgtggtatacccacacaatgaattact
actccaccaataaaaacaagggcataatgaattttgcaggcaaatggaag
gaacttgagaataacatcctgaatgagttaacccagcccaagagtacatg
catgatatgtactaacttataagtggacatgagccataaaatacctgtac
cttgttatactccacagacccagagaagctaactaagaagcaaggcccaa
gtgaagaagcttgaatctttcttagaaagaaaataaaatagttgtaagag
gcacatgagggagataactgagagggagggggcatgggaggggaatagag
gtttcatgataaatgtggggaaggaaggggggacgtcacatcggctgaaa
tacaccgtaattttttgtggaagagtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_3220485_3221014
seq2: B6Ng01-003H11.b_307_839

seq1  GCTAACAGAAACAATTTTTGAAATCAGATATCTGTTCCCTTGCAAAACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACAGAAACAATTTTTGAAATCAGATATCTGTTCCCTTGCAAAACCC  50

seq1  TCCCTGTTCTTTCTACCAAGTCCAATAGAATCATTATCCCCTTGCCTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTTCTTTCTACCAAGTCCAATAGAATCATTATCCCCTTGCCTTGA  100

seq1  GCCTAACATGCACCGCCTCTTATTGTTCCATGCCTCAGATTGCCTAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAACATGCACCGCCTCTTATTGTTCCATGCCTCAGATTGCCTAGAAA  150

seq1  TCTGCCAACAGACCCTAACTTACCTGACTCTGCCTGGCAGGCAGACTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCAACAGACCCTAACTTACCTGACTCTGCCTGGCAGGCAGACTTTT  200

seq1  CTCTCCCCCACTCCCCCCCATGCTTCAGAGAAGTGGCAAATGGCTCCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCCACTCCCCCCCATGCTTCAGAGAAGTGGCAAATGGCTCCTGA  250

seq1  CAGAGAAATAAGCAGATAGGACATCAGCAATGGAAGGAATGATTCTATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAATAAGCAGATAGGACATCAGCAATGGAAGGAATGATTCTATCC  300

seq1  AAAACTGTCTTGGTGAACCAATGTCTTCACTAGAGTCATTTATAGGATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGTCTTGGTGAACCAATGTCTTCACTAGAGTCATTTATAGGATTG  350

seq1  CGGCAGAGAGGTGTACAGGAGTACAAGTAAGGGGTGACTTAGAGGAGCAT  400
      ||||||| |||||||||||||||| |||||||||||||||||||||||||
seq2  CGGCAGATAGGTGTACAGGAGTAC-AGTAAGGGGTGACTTAGAGGAGCAT  399

seq1  CAATGATGGATTACATGAGCTTGGGTGTAAAGGAGCTACATCACTGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATGGATTACATGAGCTTGGGTGTAAAGGAGCTACATCACTGAAAA  449

seq1  ACCCCACCCAGCATGATAAC-AATTCATGGTGTCCCAACACCTGACCAA-  498
      |||||||||||||||||||| |||||||||||||||||||||||||||| 
seq2  ACCCCACCCAGCATGATAACAAATTCATGGTGTCCCAACACCTGACCAAT  499

seq1  CTTCCTACTT-CCTGTGGCTTAT-GTAGTGGAGG  530
       ||||||||| |||||||||||| ||||||||||
seq2  TTTCCTACTTCCCTGTGGCTTATGGTAGTGGAGG  533