BAC Information

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BAC

Clone NameB6Ng01-005F13
Chromosome3 (Build37)
Map Location 76,488,665 - 76,589,684
singlet/doubletdoublet
Overlap geneFstl5
Upstream geneGolph4
Downstream geneLOC100041625, LOC100041635, Dnmt3a-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005F13.bB6Ng01-005F13.g
ACCDH842506DH842507
length1,117925
definitionDH842506|Mus musculus domesticus DNA, BAC clone: B6Ng01-005F13, 5' end.DH842507|Mus musculus domesticus DNA, BAC clone: B6Ng01-005F13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,488,665 - 76,489,799)(76,588,762 - 76,589,684)
sequence
gaattctctttgctcttagaacatcttgcttgtcttgtttctgacccata
ctttgtaagatgtggttttatttcctgagaaagactttcatattctccaa
gattatctggtagttttctgtcaacttgaccaaaacgaaagtcatttcag
aggaggagacctcagttgggaaaaatggctccataagatctggctgtggg
ccattctgtagggcatttttatattggtgattgataaccaagagtacagc
tcattgtggttggtgctatcactaggctgatagtcctggaatctagaaaa
tgataactggcctgcctttatgaacacaccagtgaatatccttcctccat
ggctcttgcatcagctcctgccatgtttgagttcttgtccttacttcctt
tgaagatgaacaatgatgcagaaaaggaggctgaagtaaactctttctcc
actaagttgctttgatcatagtgtttcaccacagcagtactaactcaaat
taagacaaagagtaaacataatccattccctatggtagtttgtacctaat
aaaatattgtgcacacacattaaaggaaggcatgaattcatggagatctt
aacatattatatacaattaatttgcataagttagtacatgcaagacacct
ttatttgtaacttgaatgatttaatgtggtcttcagaaaccctctatgag
agatcactcaggtgatatgtttttttttttttttttgatttttccagaca
tggtttcttctgtgtagctctggctatcctgaaactcactctgttagacc
aggctggcctcaaactcagaaattcacctgcctctgcctcccaagttgct
gggatttaaaggcgtgtgtcacccacaactcagcagtgttataattttaa
agaagagaaattcagacctgcaaaatttcaattttagcatggtggttgag
atctgaaagcagacatcccaaccttgggcccatattttaagtcttttatc
tgcaatcctcagtagtcaatgataaatttgtagcctcatttcagtttaga
ccattcatgaaagaatataatgtcagagatgtagttttaatgagactaaa
tgcacctctataactaa
gaattcactgaaacccttaggaacaaattttccaacatcttcagtgctgg
tcctgtttgactaagactctaaggaggatagaatgattatctgggtgaga
agttggattattattttagaatgtgattgtaaaacactgtttaaaaaatt
aagcactgcaatttggctatctaaatttaattatgagatatacttttaaa
taaagtatatttttaataaaagcatgtgaatatgctatgttttgtggact
aaattaattgcaggcaagcaagacacatatgatggggagaacaagaagaa
gaaagttccacaaatagaggaacttgattctttgtctatcctacagaaat
gtaagaagatgaaaatgaatgggatggatctacacatgggtagtttgaca
atgtggtaacatttgagaggtagaacttggtagcccctttctaccttgtg
tgaattgtgaattgtaatcctcattagaattaatagaccacacctgtctc
ataatgaaaaccatttgctatagcttagcatctctgtatgtttttcccag
tctctacttcatttcttctcatttatacagaactttcttcttcctttttc
tttatgtatcacattattctttctattttatttatctatctttctttttt
ttttctatttatttatttgttgagacagggattctctgtacagtccaggc
tgtcctggaactttactttgcagtaagttttgcctcgaactcagaaatct
gcctgcctctgccttccaagtgctgggattaaaggtgtgcaccaccacct
cccagcttatctatctttttctttgagacagagtctctctaaaagttatt
tgttgttctggaactttgtgaccaggcttttcttgaatttacaaaggtat
tattcacctctgctccccatagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76488665_76489799
seq2: B6Ng01-005F13.b_48_1164

seq1  GAATTCTCTTTGCTCTTAGAACATCTTGCTTGTCTTGTTTCTGACCCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTGCTCTTAGAACATCTTGCTTGTCTTGTTTCTGACCCATA  50

seq1  CTTTGTAAGATGTGGTTTTATTTCCTGAGAAAGACTTTCATATTCTCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAAGATGTGGTTTTATTTCCTGAGAAAGACTTTCATATTCTCCAA  100

seq1  GATTATCTGGTAGTTTTCTGTCAACTTGACCAAAACGAAAGTCATTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATCTGGTAGTTTTCTGTCAACTTGACCAAAACGAAAGTCATTTCAG  150

seq1  AGGAGGAGACCTCAGTTGGGAAAAATGGCTCCATAAGATCTGGCTGTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGACCTCAGTTGGGAAAAATGGCTCCATAAGATCTGGCTGTGGG  200

seq1  CCATTCTGTAGGGCATTTTTATATTGGTGATTGATAACCAAGAGTACAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTGTAGGGCATTTTTATATTGGTGATTGATAACCAAGAGTACAGC  250

seq1  TCATTGTGGTTGGTGCTATCACTAGGCTGATAGTCCTGGAATCTAGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTGGTTGGTGCTATCACTAGGCTGATAGTCCTGGAATCTAGAAAA  300

seq1  TGATAACTGGCCTGCCTTTATGAACACACCAGTGAATATCCTTCCTCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAACTGGCCTGCCTTTATGAACACACCAGTGAATATCCTTCCTCCAT  350

seq1  GGCTCTTGCATCAGCTCCTGCCATGTTTGAGTTCTTGTCCTTACTTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTTGCATCAGCTCCTGCCATGTTTGAGTTCTTGTCCTTACTTCCTT  400

seq1  TGAAGATGAACAATGATGCAGAAAAGGAGGCTGAAGTAAACTCTTTCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATGAACAATGATGCAGAAAAGGAGGCTGAAGTAAACTCTTTCTCC  450

seq1  ACTAAGTTGCTTTGATCATAGTGTTTCACCACAGCAGTACTAACTCAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTTGCTTTGATCATAGTGTTTCACCACAGCAGTACTAACTCAAAT  500

seq1  TAAGACAAAGAGTAAACATAATCCATTCCCTATGGTAGTTTGTACCTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAAAGAGTAAACATAATCCATTCCCTATGGTAGTTTGTACCTAAT  550

seq1  AAAATATTGTGCACACACATTAAAGGAAGGCATGAATTCATGGAGATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTGTGCACACACATTAAAGGAAGGCATGAATTCATGGAGATCTT  600

seq1  AACATATTATATACAATTAATTTGCATAAGTTAGTACATGCAAGACACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTATATACAATTAATTTGCATAAGTTAGTACATGCAAGACACCT  650

seq1  TTATTTGTAACTTGAATGATTTAATGTGGTCTTCAGAAACCCTCTATGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGTAACTTGAATGATTTAATGTGGTCTTCAGAAACCCTCTATGAG  700

seq1  AGATCACTCAGGTGATATGTTTTTTTTTTTTTTTTTTTTTGATTTTTCCA  750
      |||||||||||||||||||    |||||||||||||||||||||||||||
seq2  AGATCACTCAGGTGATATG----TTTTTTTTTTTTTTTTTGATTTTTCCA  746

seq1  GACATGGTTTC-TCTGTGTAGCTCTGGCTATCCTGAAACTCACTCTG-TA  798
      ||||||||||| ||||||||||||||||||||||||||||||||||| ||
seq2  GACATGGTTTCTTCTGTGTAGCTCTGGCTATCCTGAAACTCACTCTGTTA  796

seq1  GACCAGGCTGGCCTCAAACTCAGAAATTCACCTGCCTCTGCCTCCCAAG-  847
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GACCAGGCTGGCCTCAAACTCAGAAATTCACCTGCCTCTGCCTCCCAAGT  846

seq1  TGCTGGGA-TTAAAGGCGTGTGTCA-CCACAACCCAGCAGGTGTTATAAT  895
      |||||||| |||||||||||||||| ||||||| ||||| ||||||||||
seq2  TGCTGGGATTTAAAGGCGTGTGTCACCCACAACTCAGCA-GTGTTATAAT  895

seq1  TTTAAAGAAGAGAAATACAGACCCTGCAAAA-TTCAAATTTAGCAT-GTG  943
      |||||||||||||||| |||| ||||||||| ||||| |||||||| |||
seq2  TTTAAAGAAGAGAAATTCAGA-CCTGCAAAATTTCAATTTTAGCATGGTG  944

seq1  G-TGAGATCTGAAAGCAGACATCCCAACCCTGGGCCCATATTTTTAGTC-  991
      | ||||||||||||||||||||||||||| |||||||||||||| |||| 
seq2  GTTGAGATCTGAAAGCAGACATCCCAACCTTGGGCCCATATTTTAAGTCT  994

seq1  TTTATCTGCAAATTCCTCAGTAGTCATTGATAGATTTGTAGCCTCCAGTT  1041
      |||||||||||  ||||||||||||| ||||| ||||||||||| || ||
seq2  TTTATCTGCAA--TCCTCAGTAGTCAATGATAAATTTGTAGCCT-CATTT  1041

seq1  CAGTTTTAGAACCAATTTCAATGAAAAGAAAATTAAAGGTCAGGAAGAAT  1091
      ||| ||||| ||||  ||| ||| |||||| ||  || |||||  || ||
seq2  CAG-TTTAG-ACCA--TTC-ATG-AAAGAATAT--AATGTCAG--AG-AT  1080

seq1  GTAAGTTATTAAATGAGACATAAATAGCACCTCTATATAACTAA  1135
      || |||  || |||||||| ||||| |||||||  |||||||||
seq2  GT-AGT--TTTAATGAGAC-TAAAT-GCACCTC--TATAACTAA  1117

seq1: chr3_76588762_76589684
seq2: B6Ng01-005F13.g_68_992 (reverse)

seq1  TGACTAT-GGGAGCAGAGGTG-ATTATACCTTTGTAAATTCAAGAAAAGC  48
      ||||||| ||||||||||||| || |||||||||||||||||||||||||
seq2  TGACTATGGGGAGCAGAGGTGAATAATACCTTTGTAAATTCAAGAAAAGC  50

seq1  CTGGTCAACATAGTTCCAGAACAAC-AATAACTATTTAGAGAGACTCTGT  97
      |||||| ||| |||||||||||||| ||||||| ||||||||||||||||
seq2  CTGGTC-ACAAAGTTCCAGAACAACAAATAACT-TTTAGAGAGACTCTGT  98

seq1  CTCAAAG-AAAAGATAGATAAGCTGGGAGGTGGTGGTGCACACCTTTAAT  146
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGAAAAAGATAGATAAGCTGGGAGGTGGTGGTGCACACCTTTAAT  148

seq1  CCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGC-AAA  195
      |||||||||||| ||||||||||||||||||||||||||||||||| |||
seq2  CCCAGCACTTGGAAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCAAAA  198

seq1  CTTACTGCAAAGT-AAGTTCCAGGACAGCCTGGACTGTACAGAGAATCCC  244
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTTACTGCAAAGTAAAGTTCCAGGACAGCCTGGACTGTACAGAGAATCCC  248

seq1  TGTCTCAAACAAATAAATAAATAGAAAAAAAAAAGAAAAGATAGATAAAT  294
      |||||| |||||||||||||||||||||||||||| ||||||||||||||
seq2  TGTCTC-AACAAATAAATAAATAGAAAAAAAAAAG-AAAGATAGATAAAT  296

seq1  AAAATAGAAAGAATAATGTGATACATAAAGAAAAAGGAAGAAGAAAGTTC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGAAAGAATAATGTGATACATAAAGAAAAAGGAAGAAGAAAGTTC  346

seq1  TGTATAAATGAGAAGAAATGAAGTAGAGACTGGGAAAAACATACAGAGAT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAATGAGAAGAAATGAAGTAGAGACTGGGAAAAACATACAGAGAT  396

seq1  GCTAAGCTATAGCAAATGGTTTTCATTATGAGACAGGTGTGGTCTATTAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGCTATAGCAAATGGTTTTCATTATGAGACAGGTGTGGTCTATTAA  446

seq1  TTCTAATGAGGATTACAATTCACAATTCACACAAGGTAGAAAGGGGCTAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATGAGGATTACAATTCACAATTCACACAAGGTAGAAAGGGGCTAC  496

seq1  CAAGTTCTACCTCTCAAATGTTACCACATTGTCAAACTACCCATGTGTAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCTACCTCTCAAATGTTACCACATTGTCAAACTACCCATGTGTAG  546

seq1  ATCCATCCCATTCATTTTCATCTTCTTACATTTCTGTAGGATAGACAAAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCCCATTCATTTTCATCTTCTTACATTTCTGTAGGATAGACAAAG  596

seq1  AATCAAGTTCCTCTATTTGTGGAACTTTCTTCTTCTTGTTCTCCCCATCA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGTTCCTCTATTTGTGGAACTTTCTTCTTCTTGTTCTCCCCATCA  646

seq1  TATGTGTCTTGCTTGCCTGCAATTAATTTAGTCCACAAAACATAGCATAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTCTTGCTTGCCTGCAATTAATTTAGTCCACAAAACATAGCATAT  696

seq1  TCACATGCTTTTATTAAAAATATACTTTATTTAAAAGTATATCTCATAAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGCTTTTATTAAAAATATACTTTATTTAAAAGTATATCTCATAAT  746

seq1  TAAATTTAGATAGCCAAATTGCAGTGCTTAATTTTTTAAACAGTGTTTTA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTAGATAGCCAAATTGCAGTGCTTAATTTTTTAAACAGTGTTTTA  796

seq1  CAATCACATTCTAAAATAATAATCCAACTTCTCACCCAGATAATCATTCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACATTCTAAAATAATAATCCAACTTCTCACCCAGATAATCATTCT  846

seq1  ATCCTCCTTAGAGTCTTAGTCAAACAGGACCAGCACTGAAGATGTTGGAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCTTAGAGTCTTAGTCAAACAGGACCAGCACTGAAGATGTTGGAA  896

seq1  AATTTGTTCCTAAGGGTTTCAGTGAATTC  923
      |||||||||||||||||||||||||||||
seq2  AATTTGTTCCTAAGGGTTTCAGTGAATTC  925