BAC Information

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BAC

Clone NameB6Ng01-008L05
Chromosome3 (Build37)
Map Location 41,874,785 - 41,875,351
singlet/doubletsinglet
Overlap genenone
Upstream genePgrmc2, EG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
Downstream geneLOC100039204, LOC100039219
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008L05.bB6Ng01-008L05.g
ACCDH844869DH844870
length1,147561
definitionDH844869|Mus musculus domesticus DNA, BAC clone: B6Ng01-008L05, 5' end.DH844870|Mus musculus domesticus DNA, BAC clone: B6Ng01-008L05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
ggaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatt
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagctcaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaaa
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggtccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttttgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccat
ggagagctagagaaagtagccagagctaaaggatctgcaccctatagcag
acacatatgatactgtagcagtacccgagctcctgactctagctgcaatg
tatcaaagatgctagtcgcatccatgaggaagtccattgaaccgcaactt
taatgcccagtaaggacgcaaggccaatggggatggtggtagggaat

aacagttgctgggtcactgcacccagcctcagccaggcgcttgcagctaa
catggtcagtagcaatagatggagtccggcacccttctctggatcaagac
ttcatttctgctggctcttactatagaggaaaaagtccttcaatgaggag
tcagtacacagctgtgaggtgttgaaagtacacataggagcctgatgtag
ctttctcctgagagtctctgccagtgtctgacaaatacagaactggatgc
tcacagccattcactggacagagcacagaatccccaatgaaggagctaga
gagaggactcaaggagatgaaggggtctgcaaccctataggaggaacaac
aatatgaaccaaccagtacccccagagttccctgggactaaaccaccaac
caaagaaaacacatggtgggactgcatatgtagcagatgatggcctagtt
ggtcaccagtgggaggagaggaccttggtcctgtgaaggttctatgcccc
agtataggggaatgccaggaccaggaagtaggagtgggtgggttggtgag
cagggggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41874785_41875351
seq2: B6Ng01-008L05.g_70_636

seq1  GAATTCAACAGTTGCTGGGTCACTGCACCCAGCCTCAGCCAGGCGCTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGTTGCTGGGTCACTGCACCCAGCCTCAGCCAGGCGCTTGC  50

seq1  AGCTAACATGGTCAGTAGCAATAGATGGAGTCCGGCACCCTTCTCTGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAACATGGTCAGTAGCAATAGATGGAGTCCGGCACCCTTCTCTGGAT  100

seq1  CAAGACTTCATTTCTGCTGGCTCTTACTATAGAGGAAAAAGTCCTTCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTTCATTTCTGCTGGCTCTTACTATAGAGGAAAAAGTCCTTCAAT  150

seq1  GAGGAGTCAGTACACAGCTGTGAGGTGTTGAAAGTACACATAGGAGCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGTCAGTACACAGCTGTGAGGTGTTGAAAGTACACATAGGAGCCTG  200

seq1  ATGTAGCTTTCTCCTGAGAGTCTCTGCCAGTGTCTGACAAATACAGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGCTTTCTCCTGAGAGTCTCTGCCAGTGTCTGACAAATACAGAACT  250

seq1  GGATGCTCACAGCCATTCACTGGACAGAGCACAGAATCCCCAATGAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTCACAGCCATTCACTGGACAGAGCACAGAATCCCCAATGAAGGA  300

seq1  GCTAGAGAGAGGACTCAAGGAGATGAAGGGGTCTGCAACCCTATAGGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGAGAGGACTCAAGGAGATGAAGGGGTCTGCAACCCTATAGGAGG  350

seq1  AACAACAATATGAACCAACCAGTACCCCCAGAGTTCCCTGGGACTAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAATATGAACCAACCAGTACCCCCAGAGTTCCCTGGGACTAAACC  400

seq1  ACCAACCAAAGAAAACACATGGTGGGACTGCATATGTAGCAGATGATGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCAAAGAAAACACATGGTGGGACTGCATATGTAGCAGATGATGGC  450

seq1  CTAGTTGGTCACCAGTGGGAGGAGAGGACCTTGGTCCTGTGAAGGTTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTGGTCACCAGTGGGAGGAGAGGACCTTGGTCCTGTGAAGGTTCTA  500

seq1  TGCCCCAGTATAGGGGAATGCCAGGACCAGGAAGTAGGAGTGGGTGGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCAGTATAGGGGAATGCCAGGACCAGGAAGTAGGAGTGGGTGGGTT  550

seq1  GGTGAGCAGGGGGAGGA  567
      |||||||||||||||||
seq2  GGTGAGCAGGGGGAGGA  567


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