BAC Information

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BAC

Clone NameB6Ng01-010E10
Chromosome3 (Build37)
Map Location 41,795,554 - 41,796,712
singlet/doubletsinglet
Overlap genenone
Upstream genePgrmc2, EG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
Downstream geneLOC100039204, LOC100039219
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010E10.bB6Ng01-010E10.g
ACCDH845989DH845990
length1,1681,152
definitionDH845989|Mus musculus domesticus DNA, BAC clone: B6Ng01-010E10, 5' end.DH845990|Mus musculus domesticus DNA, BAC clone: B6Ng01-010E10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatatcaaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaattcaaatcaaaacaaccctgagat
tccacctcacaccagttagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggcacactcctccattgctgttg
ggattgcaagcttgtacaaccagtctggaaatcagtctggtggttcctca
gaaaattgaacatagtactactatggaggatccagcaatacccctcctgg
gcatatatcctgaagatgtcccaaccggtaagaaggacacatgttccagt
atgttcatagcagccttatatatattagccagaagctggaaagaacccag
atgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaa
tggagtactactctgctattaaaatgaatgaatttatgaaattcctaggc
aaatggatggacctggagggcatcatcctgagtgaggtaacccaatcaca
aaggaactcacataatatgtactcactgataagtggatattagcccagaa
acttaggatacccaagatataagatacaatttgctaaacgcatgaaactc
aagaagaacaaagaccaaagtgtgaatgaacactttgcatcttctgagaa
ttgggaacaaaacacccatggaaggagttacagagacaatgtttgaagct
gtgacaaaaggatgaaccatctagagcctgccatatacagggatccatcc
cataatcagcttccaaatgctgacaccattgcatacactaacaagatttt
gctgaaatttcccagatatagctgtctcttgtgagactatgccggggcct
agcaacacagagtgtatgctcacagtcagctatgggatggatcacagggc
cccaaagagagataagaagtacccaaggagcttaaggaccccaaccttat
agtgaacaacattatgactaacagtacccagagtcttgatctaggtgcta
tttatcaaagatggctatagcatcctgaagagggccttggacttgcatct
tatttgcccatgacgggaaggtcgggcaaaaggggatgtgctgggtgaga
gatggggcggaggctctt

gaattccaaagcagtttttcctcccttcatgtaagaacaaggaaagaatc
tccagattgatgaatcaaaatttatacaactcacctcactgttgatctga
aaacttccagtctccacagctgtgaacagtatgtttctattctttgtaag
ccccaaagtctaagacattttattaagtaccccagtggctgagtctttgt
gtaaggcatccacgttctactgcagagacaacaaacgaatgaatgtgtta
ttaagatgagacagatatggagtgggcagagaagtcccctctgtggaatg
acttccaagctgaaacttaaggcttaaaataaggcttcctctgacagaga
aattctaggcctgacagaatttcaaaagctcaaaaaccgtagtacaatac
tcaaaagagagtgaggcttaaggttcagtgacaggaaatcagatatggaa
gtttgggggtgactggtgcatctgtttgctcactcagctggattgagggg
gctagaatattagtaaagcatagtagttctagatgctggggaaggtggca
aatgggtcagcagattgaagacagagatcccctaacaacagcgaatggta
ccactggatagacgaaacaagcagcagaggaatggggacatgtgcccaat
acacaagcttgcttcatcttcattaggcccaattttgctgcttccatgcc
agcaaagccagaatccagtttcctgtgcctttgtatgtaaggacactggc
acctctctgaagagcttacaggtcttcagcaacaggcaggacaaccacca
tcagtcactcctatttgagcttcccactctcctttctctgacctgccact
acctattgcacaaatttacatccttcacggagaggtttgccacagcatct
aggggagccatcttggttcccctatcctcctgagactagtctgcacaggt
aagagtgtggactacaaaagctaacagctctggacaggcagaagccacag
agtttctggagcagactacatttgggcctccagacatcagacccaattcc
ctgccagaggagaggtgtccaccccgcccagaagggctttgcttacacaa
cttggggaccatcttggatccgaatcccactaccagtctgcccaggtggg
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41795554_41796712
seq2: B6Ng01-010E10.g_66_1217 (reverse)

seq1  CTCCCACCTGGGCAGACTAGTCTAGGTGGGATCCGGGAACCAAGATGGCT  50
      |||||||||||||||||| ||    ||||||| | ||| ||||||||| |
seq2  CTCCCACCTGGGCAGACTGGT---AGTGGGATTC-GGATCCAAGATGG-T  45

seq1  CCCCCAGGTGCTGT-AGCAAAGCCCTCCTGGGCGGGGTGGACACCTCTCC  99
      |||| || || ||| ||||||||||| |||||||||||||||||||||||
seq2  CCCCAAGTTG-TGTAAGCAAAGCCCTTCTGGGCGGGGTGGACACCTCTCC  94

seq1  TCTGGCAGGGAA-TGTGTCTGGATGTCTGGAGCCCCAAATGTAGTCTGCC  148
      |||||||||||| || |||| ||||||||||| |||||||||||||||| 
seq2  TCTGGCAGGGAATTGGGTCT-GATGTCTGGAGGCCCAAATGTAGTCTGCT  143

seq1  TCAGAAACTCTGTGGCTTCTGCCTGTCCCAGAAGCTGTTAGCTTTTGTAG  198
       ||||||||||||||||||||||||| |||| ||||||||||||||||||
seq2  CCAGAAACTCTGTGGCTTCTGCCTGT-CCAG-AGCTGTTAGCTTTTGTAG  191

seq1  TCCACACTCTTACCTGTGCAGACTAGTCTCAGGGGGATAGGGGAACCAAG  248
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCCACACTCTTACCTGTGCAGACTAGTCTCAGGAGGATAGGGGAACCAAG  241

seq1  ATGGCTCCCCTAGATGCTGTGGCAAACCTCTCCGTGAAGGATGTAAATTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCCCCTAGATGCTGTGGCAAACCTCTCCGTGAAGGATGTAAATTT  291

seq1  GTGCAATAGGTAGTGGCAGGTCAGAGAAAGGAGAGTGGGAAGCTCAAATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAATAGGTAGTGGCAGGTCAGAGAAAGGAGAGTGGGAAGCTCAAATA  341

seq1  GGAGTGACTGATGGTGGTTGTCCTGCCTGTTGCTGAAGACCTGTAAGCTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGACTGATGGTGGTTGTCCTGCCTGTTGCTGAAGACCTGTAAGCTC  391

seq1  TTCAGAGAGGTGCCAGTGTCCTTACATACAAAGGCACAGGAAACTGGATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGAGGTGCCAGTGTCCTTACATACAAAGGCACAGGAAACTGGATT  441

seq1  CTGGCTTTGCTGGCATGGAAGCAGCAAAATTGGGCCTAATGAAGATGAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTTGCTGGCATGGAAGCAGCAAAATTGGGCCTAATGAAGATGAAG  491

seq1  CAAGCTTGTGTATTGGGCACATGTCCCCATTCCTCTGCTGCTTGTTTCGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTGTGTATTGGGCACATGTCCCCATTCCTCTGCTGCTTGTTTCGT  541

seq1  CTATCCAGTGGTACCATTCGCTGTTGTTAGGGGATCTCTGTCTTCAATCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCAGTGGTACCATTCGCTGTTGTTAGGGGATCTCTGTCTTCAATCT  591

seq1  GCTGACCCATTTGCCACCTTCCCCAGCATCTAGAACTACTATGCTTTACT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACCCATTTGCCACCTTCCCCAGCATCTAGAACTACTATGCTTTACT  641

seq1  AATATTCTAGCCCCCTCAATCCAGCTGAGTGAGCAAACAGATGCACCAGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTAGCCCCCTCAATCCAGCTGAGTGAGCAAACAGATGCACCAGT  691

seq1  CACCCCCAAACTTCCATATCTGATTTCCTGTCACTGAACCTTAAGCCTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCAAACTTCCATATCTGATTTCCTGTCACTGAACCTTAAGCCTCA  741

seq1  CTCTCTTTTGAGTATTGTACTACGGTTTTTGAGCTTTTGAAATTCTGTCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTTGAGTATTGTACTACGGTTTTTGAGCTTTTGAAATTCTGTCA  791

seq1  GGCCTAGAATTTCTCTGTCAGAGGAAGCCTTATTTTAAGCCTTAAGTTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAGAATTTCTCTGTCAGAGGAAGCCTTATTTTAAGCCTTAAGTTTC  841

seq1  AGCTTGGAAGTCATTCCACAGAGGGGACTTCTCTGCCCACTCCATATCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGAAGTCATTCCACAGAGGGGACTTCTCTGCCCACTCCATATCTG  891

seq1  TCTCATCTTAATAACACATTCATTCGTTTGTTGTCTCTGCAGTAGAACGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCTTAATAACACATTCATTCGTTTGTTGTCTCTGCAGTAGAACGT  941

seq1  GGATGCCTTACACAAAGACTCAGCCACTGGGGTACTTAATAAAATGTCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCCTTACACAAAGACTCAGCCACTGGGGTACTTAATAAAATGTCTT  991

seq1  AGACTTTGGGGCTTACAAAGAATAGAAACATACTGTTCACAGCTGTGGAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTGGGGCTTACAAAGAATAGAAACATACTGTTCACAGCTGTGGAG  1041

seq1  ACTGGAAGTTTTCAGATCAACAGTGAGGTGAGTTGTATAAATTTTGATTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAGTTTTCAGATCAACAGTGAGGTGAGTTGTATAAATTTTGATTC  1091

seq1  ATCAATCTGGAGATTCTTTCCTTGTTCTTACATGAAGGGAGGAAAAACTG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCTGGAGATTCTTTCCTTGTTCTTACATGAAGGGAGGAAAAACTG  1141

seq1  CTTTGGAATTC  1159
      |||||||||||
seq2  CTTTGGAATTC  1152


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