BAC Information

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BAC

Clone NameB6Ng01-014G24
Chromosome3 (Build37)
Map Location 124,937,151 - 125,088,852
singlet/doubletdoublet
Overlap genenone
Upstream geneEG668809, Tram1l1, LOC100043740, 1700006A11Rik, 1700003H04Rik, LOC668817, LOC668820
Downstream geneNdst4, Ugt8a, Arsj
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014G24.bB6Ng01-014G24.g
ACCDH848982DH848983
length1,0401,036
definitionDH848982|Mus musculus domesticus DNA, BAC clone: B6Ng01-014G24, 5' end.DH848983|Mus musculus domesticus DNA, BAC clone: B6Ng01-014G24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,087,793 - 125,088,852)(124,937,151 - 124,938,208)
sequence
gaattctttgtttagctctgtaccccatttttaatggggttatttgaatt
tctggtgtccagcttcttcattgcccttattttctcagactttgatgtgc
taacacacaatctttcttcaactggcaactaaattgaattattaaaattt
aactaaattatccaaaagacactgaaggaagactttttgtcagtcataaa
atgttttattttaaaaatttaaataaaatttgaaaggcaacacatggcaa
agaaacaaattaacacacaacttatgtcataattacacccctgaactgtt
tttttttttttttttatggtatggtacactaaatctcaatttcttacatt
catggcatttttaaaaataacattgtcaacttagaacttaaaaaaggatc
tgttaatattataaagctgcttaagacattttccatttagttttctatcg
tttcccacattaatggaacaatcaacatactaagttggtaggaagtatac
cagtacttaataaatcactcccaagtctatgataactaaagcaaggattt
ttatagtgtatttagctatttattttctcaaaagcattttccttcccaac
taagatttttttgtaagatacaaaaattttgtctttttattcctagtcaa
attcaggttgtagtggttgtggctttttcctaaaatatatactttaataa
atatatattgatatactctactcaatgtaaaatataaagttctgtataag
tatgcattttatcttgacaaagtttataaaaaataacctcacattagata
tagagaaacatgtcagagaaagtctacttttcttttcaagcagaaaccaa
gtatgtttggaaagttcagccatcaattccatcaaatactcagaatgtac
tgtcagacatatttgaacatggacaatgtacacatggtctctgtgtctct
atgcagaaagcagcacatcaggctagactgaggctaacaaagcatgaaag
aacattctattctacatacattctctacatatcctgactt
gaattcaaaattattttctgattcccatttgtctcaggtatacacatagt
acacatagttgcatgtgggcaaatcaatcatacacatgaaatttttaaaa
aattctgaaagtaaaataaatttctttgttctgattctttgaccattcac
acttttatgttcatatttgtgtttgtatgtttatttatgctgctatagca
cattgatattgagtggggttctaaacacattcataaaaaatatcaaagtt
tgaaatcttagataaccaataaaatatctttttcttttcttcctaagact
acatggtaaaaaaacccacaaacagcttcaaagatgatgctttcttaaat
tatgtttaaagctataaagaggctgtgattagaggtcaactgaaagcagg
catacctttattgtaaggtcattacaggatcttgagtgatacctaattta
aagtccatgaaaataaattgaaagatcactttttatgaattcataatggc
cttacacttttaacaggaggtaaagtgcgctaatgaaatcataaaaatga
aggcagtatgcctttgaccaaaccagtctttatgcttgcctgagaacctt
agcttaggaaacaatcactttattcatctataggataaaatacttgcaaa
tttcaacgtaagaaatgggtggaacttaggggcataattaggataattag
tgtgtaactattttacattattgtattgttgtacattataagcacataat
gaatttcagctacatgtaatagaattgtttgtaatagagtcatgacaaac
acttaaagtacaacattggttattaaaattacataggttaattttagcag
taattttataaagtttataatgatcttttatataaagtcattggacccat
gcttcattatatatacatcaaatatactgtttaatatgcatcatcattaa
taaacatttgtattttagagcaactataaatgcggttctattgaaatgga
ttttaagtaggaatttgataaacatagcatttggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_125087793_125088852
seq2: B6Ng01-014G24.b_44_1083 (reverse)

seq1  AAGTCAAGAATATGTAGAGAATGTGATAGTAGAATAGAATGTTCTTTCCA  50
      ||||| || ||||||||||||||| || ||||||||||||||||||||  
seq2  AAGTC-AGGATATGTAGAGAATGT-AT-GTAGAATAGAATGTTCTTTC--  45

seq1  TTGCTTTGGTTAGCCTCAGTCTAGCCTGATTGTGGCTGCTTTCCTTGCAT  100
       |||||| ||||||||||||||||||||| ||| |||||||||  |||||
seq2  ATGCTTT-GTTAGCCTCAGTCTAGCCTGA-TGT-GCTGCTTTC--TGCAT  90

seq1  AAGAGACAACAGAGACCATTGTGTTACATTTGTCCATGTTCAAATATGTC  150
       |||||| |||||||||| |||| |||| |||||||||||||||||||||
seq2  -AGAGAC-ACAGAGACCA-TGTG-TACA-TTGTCCATGTTCAAATATGTC  135

seq1  TGACAAGTACATTCTGAGTATTTGATGGAATTGATTGCTGGAACTTTCCA  200
      |||| |||||||||||||||||||||||||||||| ||| ||||||||||
seq2  TGAC-AGTACATTCTGAGTATTTGATGGAATTGATGGCT-GAACTTTCCA  183

seq1  AACATACTTGGTTTCTTGCTTGAAAAGAAAAGTAGACTTTCTCTGACATG  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AACATACTTGGTTTC-TGCTTGAAAAGAAAAGTAGACTTTCTCTGACATG  232

seq1  TTTCTCTATTATCTAATGTTGAGGTTATTTTTTATAAACTTTGTCAAGAT  300
      |||||||| ||||||||| |||||||||||||||||||||||||||||||
seq2  TTTCTCTA-TATCTAATG-TGAGGTTATTTTTTATAAACTTTGTCAAGAT  280

seq1  AAAATGCATACTTATACAGAACTTTATATTTTACATTGAGTAGAGTATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCATACTTATACAGAACTTTATATTTTACATTGAGTAGAGTATAT  330

seq1  CAATATATATTTATTAAAGTATATATTTTAGGAAAAAGCCACAACCACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATATATTTATTAAAGTATATATTTTAGGAAAAAGCCACAACCACTA  380

seq1  CAACCTGAATTTGACTAGGAATAAAAAGACAAAATTTTTGTATCTTACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGAATTTGACTAGGAATAAAAAGACAAAATTTTTGTATCTTACAA  430

seq1  AAAAATCTTAGTTGGGAAGGAAAATGCTTTTGAGAAAATAAATAGCTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCTTAGTTGGGAAGGAAAATGCTTTTGAGAAAATAAATAGCTAAA  480

seq1  TACACTATAAAAATCCTTGCTTTAGTTATCATAGACTTGGGAGTGATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTATAAAAATCCTTGCTTTAGTTATCATAGACTTGGGAGTGATTTA  530

seq1  TTAAGTACTGGTATACTTCCTACCAACTTAGTATGTTGATTGTTCCATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTACTGGTATACTTCCTACCAACTTAGTATGTTGATTGTTCCATTA  580

seq1  ATGTGGGAAACGATAGAAAACTAAATGGAAAATGTCTTAAGCAGCTTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGAAACGATAGAAAACTAAATGGAAAATGTCTTAAGCAGCTTTAT  630

seq1  AATATTAACAGATCCTTTTTTAAGTTCTAAGTTGACAATGTTATTTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAACAGATCCTTTTTTAAGTTCTAAGTTGACAATGTTATTTTTAA  680

seq1  AAATGCCATGAATGTAAGAAATTGAGATTTAGTGTACCATACCATAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCATGAATGTAAGAAATTGAGATTTAGTGTACCATACCATAAAAA  730

seq1  AAAAAAAAAAAACAGTTCAGGGGTGTAATTATGACATAAGTTGTGTGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAACAGTTCAGGGGTGTAATTATGACATAAGTTGTGTGTTA  780

seq1  ATTTGTTTCTTTGCCATGTGTTGCCTTTCAAATTTTATTTAAATTTTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTTCTTTGCCATGTGTTGCCTTTCAAATTTTATTTAAATTTTTAA  830

seq1  AATAAAACATTTTATGACTGACAAAAAGTCTTCCTTCAGTGTCTTTTGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACATTTTATGACTGACAAAAAGTCTTCCTTCAGTGTCTTTTGGA  880

seq1  TAATTTAGTTAAATTTTAATAATTCAATTTAGTTGCCAGTTGAAGAAAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAGTTAAATTTTAATAATTCAATTTAGTTGCCAGTTGAAGAAAGA  930

seq1  TTGTGTGTTAGCACATCAAAGTCTGAGAAAATAAGGGCAATGAAGAAGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGTTAGCACATCAAAGTCTGAGAAAATAAGGGCAATGAAGAAGCT  980

seq1  GGACACCAGAAATTCAAATAACCCCATTAAAAATGGGGTACAGAGCTAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCAGAAATTCAAATAACCCCATTAAAAATGGGGTACAGAGCTAAA  1030

seq1  CAAAGAATTC  1060
      ||||||||||
seq2  CAAAGAATTC  1040

seq1: chr3_124937151_124938208
seq2: B6Ng01-014G24.g_65_1100

seq1  GAATTCAAAATTATTTTCTGATTCCCATTTGTCTCAGGTATACACATAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATTATTTTCTGATTCCCATTTGTCTCAGGTATACACATAGT  50

seq1  ACACATAGTTGCATGTGGGCAAATCAATCATACACATGAAATTTTTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATAGTTGCATGTGGGCAAATCAATCATACACATGAAATTTTTAAAA  100

seq1  AATTCTGAAAGTAAAATAAATTTCTTTGTTCTGATTCTTTGACCATTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGAAAGTAAAATAAATTTCTTTGTTCTGATTCTTTGACCATTCAC  150

seq1  ACTTTTATGTTCATATTTGTGTTTGTATGTTTATTTATGCTGCTATAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTATGTTCATATTTGTGTTTGTATGTTTATTTATGCTGCTATAGCA  200

seq1  CATTGATATTGAGTGGGGTTCTAAACACATTCATAAAAAATATCAAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATATTGAGTGGGGTTCTAAACACATTCATAAAAAATATCAAAGTT  250

seq1  TGAAATCTTAGATAACCAATAAAATATCTTTTTCTTTTCTTCCTAAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCTTAGATAACCAATAAAATATCTTTTTCTTTTCTTCCTAAGACT  300

seq1  ACATGGTAAAAAAACCCACAAACAGCTTCAAAGATGATGCTTTCTTAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTAAAAAAACCCACAAACAGCTTCAAAGATGATGCTTTCTTAAAT  350

seq1  TATGTTTAAAGCTATAAAGAGGCTGTGATTAGAGGTCAACTGAAAGCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTAAAGCTATAAAGAGGCTGTGATTAGAGGTCAACTGAAAGCAGG  400

seq1  CATACCTTTATTGTAAGGTCATTACAGGATCTTGAGTGATACCTAATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTTTATTGTAAGGTCATTACAGGATCTTGAGTGATACCTAATTTA  450

seq1  AAGTCCATGAAAATAAATTGAAAGATCACTTTTTATGAATTCATAATGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCATGAAAATAAATTGAAAGATCACTTTTTATGAATTCATAATGGC  500

seq1  CTTACACTTTTAACAGGAGGTAAAGTGCGCTAATGAAATCATAAAAATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACACTTTTAACAGGAGGTAAAGTGCGCTAATGAAATCATAAAAATGA  550

seq1  AGGCAGTATGCCTTTGACCAAACCAGTCTTTATGCTTGCCTGAGAACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGTATGCCTTTGACCAAACCAGTCTTTATGCTTGCCTGAGAACCTT  600

seq1  AGCTTAGGAAACAATCACTTTATTCATCTATAGGATAAAATACTTGCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAGGAAACAATCACTTTATTCATCTATAGGATAAAATACTTGCAAA  650

seq1  TTTCAACGTAAGAAATGGGTGGAACTTAGGGGCATAATTAGGATAATTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACGTAAGAAATGGGTGGAACTTAGGGGCATAATTAGGATAATTAG  700

seq1  TGTGTAACTATTTTACATTATTGTATTGTTGTACATTATAAGCACATAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAACTATTTTACATTATTGTATTGTTGTACATTATAAGCACATAAT  750

seq1  GAATTTCAGCTACATGTAATAGAATTGTTTGTAATAGAGTCATGACAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCAGCTACATGTAATAGAATTGTTTGTAATAGAGTCATGACAAAC  800

seq1  ACTTAAAGTACAACATTGGTTATTAAAATTAACATAGGTTAATTTTAGCA  850
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACTTAAAGTACAACATTGGTTATTAAAATT-ACATAGGTTAATTTTAGCA  849

seq1  GTAATTTTATTAAAAGTTTTAATAAATGATCTTTTATATAAAGTCATTGG  900
      ||||||||||  |||||||  || ||||||||||||||||||||||||||
seq2  GTAATTTTAT--AAAGTTT--AT-AATGATCTTTTATATAAAGTCATTGG  894

seq1  ACCCCATGCTTCAATTAATAATATA-ACATCAAATATACTGTTTAATATG  949
      | ||||||||||     || ||||| ||||||||||||||||||||||||
seq2  A-CCCATGCTTC-----ATTATATATACATCAAATATACTGTTTAATATG  938

seq1  CAATCATCATTAAATAAACATTTGTATTTTAGAGCAAAACTATAAAATGC  999
      | ||||||||| |||||||||||||||||||||||  |||||| ||||||
seq2  C-ATCATCATT-AATAAACATTTGTATTTTAGAGC--AACTAT-AAATGC  983

seq1  GTGTTCTATTGAAATGGAATTTTAAGTAAGGAATTTGAATTAAACATAGC  1049
      | ||||||||||||||| ||||||||| ||||||||||  ||||||||||
seq2  G-GTTCTATTGAAATGG-ATTTTAAGT-AGGAATTTGA--TAAACATAGC  1028

seq1  ATTTTGGTT  1058
      | |||||||
seq2  A-TTTGGTT  1036