BAC Information

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BAC

Clone NameB6Ng01-017H12
Chromosome3 (Build37)
Map Location 137,690,215 - 137,843,824
singlet/doubletdoublet
Overlap geneEG329763, LOC100039528, Mttp, Rg9mtd2, 4930579F01Rik
Upstream geneLOC100039447, Emcn, EG229862, Ddit4l, LOC668874, H2afz, Dnajb14, Map2k1ip1, Dapp1
Downstream geneAdh7, Adh1, Adh6a, LOC639769, Adh4, Adh5, Metap1, EG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1, Tspan5, LOC620771, Rap1gds1, EG229879
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017H12.bB6Ng01-017H12.g
ACCDH851144DH851145
length827962
definitionDH851144|Mus musculus domesticus DNA, BAC clone: B6Ng01-017H12, 5' end.DH851145|Mus musculus domesticus DNA, BAC clone: B6Ng01-017H12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,842,998 - 137,843,824)(137,690,215 - 137,691,173)
sequence
gaattcaatgaccaacccaggaaatggttctacccactttgaggctttgt
catcccacatccactaagacaattaagacgctgcctcatagacgtgctta
caggccaacctgctctagagaattccttcctgaggctcttcctaggtgac
tctaggttgggtcaggctgtcaatctgacttctagatctcaggacagaag
tttataccccagtccttccaatgtaattacacatggtcagttccttatat
taaattttttcttaaaacagagtaggttctgtttctagcaaaggagcact
aactgaacacactcaccaagcagaatgctgctcgttaccagaaggtaaca
atctttcttcagacagaactgataaatttagttactctggggactgtgca
gaaaacgtttactttctaaaaaaaaatggtgcataactatgactttgctt
agaaaagacattgttttcatgtcagtagacaggaggctaagcaaagctgt
ggatggtttcaggctgagagggatttagttagatcacagatgagcaatag
ggttggaagatgagagacaaagaatacaactacagcccagggcaaatctt
ctgtcttcggggcaaacaaaacatacacagtgtctgtgaaacagaagcga
cagggacatggataagaaacatacagtaaggttctgcttttacagtcagt
ttaactgaatcaggaaaccttggagtagccagggctgctggaagagacct
gcaactctagtcacttgggaagttgagcaggacgttctcaggtcagcctg
ggtagtggtgtgaggtgggacaggtga
gaattcctaacatgtctgatttgaggttgtttggacttagattcaggaac
atgtgagactaataatcccaaagttctccactaggtatcacatatgcata
cgtaaatatttagttgcaaggtacctactggcaagagatcccaacctccc
tattttatgaatggggactctatgtccagaaaaatatagtgacctgccaa
aggtcttactgctcggttagtagcaaggatagaaatagactcagttccag
ggttctcaggctccagcttctcacaggcattctctgcctctgccttttcc
tggcctccctatgaaccccccccccccacatccacacccaccacaaggtc
agttaccataggattctcctctgtcttcttaggcaccgtttcaaatctaa
caccgcaacgtccttggctttcaccttcagtttggattcaatctttgggc
agtttttctaagcaacacccagaatacatattatgtctccacaagacttg
gcaattcaccgtggtaaaaagagtgagtcaccaattttcagtcagagagg
aacaacatctttcagggaagagatggttggagctgttttcagatggcata
gcctgagatatgctactgtcatactgtgaactgaggccagagactaccaa
agatcagctatgcaagaagaagcccaggcccacgtagtcaatagggctaa
cacccaaaacactggggctaaatacacaccatttgttctcttcagaagct
ctgttctcctaactcaagatgttggaagaacacttagctcagtggtctga
agacttagagtcaaagaccaagcttcaggccccacacctaacaacttctg
ttgacctttgtaaaatcacttaaagtatttgcagttcagcttgcttatct
ctgagaatgtgggtgggaaaatattagcctggttctttcacctggctgca
gtggagcagcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_137842998_137843824
seq2: B6Ng01-017H12.b_48_874 (reverse)

seq1  TCACCTGTCCCACCTCACACCACTACCCAGGCTGACCTGAGAACGTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGTCCCACCTCACACCACTACCCAGGCTGACCTGAGAACGTCCTG  50

seq1  CTCAACTTCCCAAGTGACTAGAGTTGCAGGTCTCTTCCAGCAGCCCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACTTCCCAAGTGACTAGAGTTGCAGGTCTCTTCCAGCAGCCCTGGC  100

seq1  TACTCCAAGGTTTCCTGATTCAGTTAAACTGACTGTAAAAGCAGAACCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCAAGGTTTCCTGATTCAGTTAAACTGACTGTAAAAGCAGAACCTT  150

seq1  ACTGTATGTTTCTTATCCATGTCCCTGTCGCTTCTGTTTCACAGACACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATGTTTCTTATCCATGTCCCTGTCGCTTCTGTTTCACAGACACTG  200

seq1  TGTATGTTTTGTTTGCCCCGAAGACAGAAGATTTGCCCTGGGCTGTAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTTTTGTTTGCCCCGAAGACAGAAGATTTGCCCTGGGCTGTAGTT  250

seq1  GTATTCTTTGTCTCTCATCTTCCAACCCTATTGCTCATCTGTGATCTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTTTGTCTCTCATCTTCCAACCCTATTGCTCATCTGTGATCTAAC  300

seq1  TAAATCCCTCTCAGCCTGAAACCATCCACAGCTTTGCTTAGCCTCCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCCTCTCAGCCTGAAACCATCCACAGCTTTGCTTAGCCTCCTGTC  350

seq1  TACTGACATGAAAACAATGTCTTTTCTAAGCAAAGTCATAGTTATGCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGACATGAAAACAATGTCTTTTCTAAGCAAAGTCATAGTTATGCACC  400

seq1  ATTTTTTTTTAGAAAGTAAACGTTTTCTGCACAGTCCCCAGAGTAACTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTTAGAAAGTAAACGTTTTCTGCACAGTCCCCAGAGTAACTAA  450

seq1  ATTTATCAGTTCTGTCTGAAGAAAGATTGTTACCTTCTGGTAACGAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCAGTTCTGTCTGAAGAAAGATTGTTACCTTCTGGTAACGAGCAG  500

seq1  CATTCTGCTTGGTGAGTGTGTTCAGTTAGTGCTCCTTTGCTAGAAACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGCTTGGTGAGTGTGTTCAGTTAGTGCTCCTTTGCTAGAAACAGA  550

seq1  ACCTACTCTGTTTTAAGAAAAAATTTAATATAAGGAACTGACCATGTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTCTGTTTTAAGAAAAAATTTAATATAAGGAACTGACCATGTGTA  600

seq1  ATTACATTGGAAGGACTGGGGTATAAACTTCTGTCCTGAGATCTAGAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTGGAAGGACTGGGGTATAAACTTCTGTCCTGAGATCTAGAAGT  650

seq1  CAGATTGACAGCCTGACCCAACCTAGAGTCACCTAGGAAGAGCCTCAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGACAGCCTGACCCAACCTAGAGTCACCTAGGAAGAGCCTCAGGA  700

seq1  AGGAATTCTCTAGAGCAGGTTGGCCTGTAAGCACGTCTATGAGGCAGCGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTCTCTAGAGCAGGTTGGCCTGTAAGCACGTCTATGAGGCAGCGT  750

seq1  CTTAATTGTCTTAGTGGATGTGGGATGACAAAGCCTCAAAGTGGGTAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTGTCTTAGTGGATGTGGGATGACAAAGCCTCAAAGTGGGTAGAA  800

seq1  CCATTTCCTGGGTTGGTCATTGAATTC  827
      |||||||||||||||||||||||||||
seq2  CCATTTCCTGGGTTGGTCATTGAATTC  827

seq1: chr3_137690215_137691173
seq2: B6Ng01-017H12.g_69_1030

seq1  GAATTCCTAACATGTCTGATTTGAGGTTGTTTGGACTTAGATTCAGGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAACATGTCTGATTTGAGGTTGTTTGGACTTAGATTCAGGAAC  50

seq1  ATGTGAGACTAATAATCCCAAAGTTCTCCACTAGGTATCACATATGCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGACTAATAATCCCAAAGTTCTCCACTAGGTATCACATATGCATA  100

seq1  CGTAAATATTTAGTTGCAAGGTACCTACTGGCAAGAGATCCCAACCTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAAATATTTAGTTGCAAGGTACCTACTGGCAAGAGATCCCAACCTCCC  150

seq1  TATTTTATGAATGGGGACTCTATGTCCAGAAAAATATAGTGACCTGCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATGAATGGGGACTCTATGTCCAGAAAAATATAGTGACCTGCCAA  200

seq1  AGGTCTTACTGCTCGGTTAGTAGCAAGGATAGAAATAGACTCAGTTCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTACTGCTCGGTTAGTAGCAAGGATAGAAATAGACTCAGTTCCAG  250

seq1  GGTTCTCAGGCTCCAGCTTCTCACAGGCATTCTCTGCCTCTGCCTTTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTCAGGCTCCAGCTTCTCACAGGCATTCTCTGCCTCTGCCTTTTCC  300

seq1  TGGCCTCCCTATGAACCCCCCCCCCCCACATCCACACCCACCACAAGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCCCTATGAACCCCCCCCCCCCACATCCACACCCACCACAAGGTC  350

seq1  AGTTACCATAGGATTCTCCTCTGTCTTCTTAGGCACCGTTTCAAATCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCATAGGATTCTCCTCTGTCTTCTTAGGCACCGTTTCAAATCTAA  400

seq1  CACCGCAACGTCCTTGGCTTTCACCTTCAGTTTGGATTCAATCTTTGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGCAACGTCCTTGGCTTTCACCTTCAGTTTGGATTCAATCTTTGGGC  450

seq1  AGTTTTTCTAAGCAACACCCAGAATACATATTATGTCTCCACAAGACTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTCTAAGCAACACCCAGAATACATATTATGTCTCCACAAGACTTG  500

seq1  GCAATTCACCGTGGTAAAAAGAGTGAGTCACCAATTTTCAGTCAGAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTCACCGTGGTAAAAAGAGTGAGTCACCAATTTTCAGTCAGAGAGG  550

seq1  AACAACATCTTTCAGGGAAGAGATGGTTGGAGCTGTTTTCAGATGGCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACATCTTTCAGGGAAGAGATGGTTGGAGCTGTTTTCAGATGGCATA  600

seq1  GCCTGAGATATGCTACTGTCATACTGTGAACTGAGGCCAGAGACTACCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGATATGCTACTGTCATACTGTGAACTGAGGCCAGAGACTACCAA  650

seq1  AGATCAGCTATGCAAGAAGAAGCCCAGGCCCACGTAGTCAATAGGGCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGCTATGCAAGAAGAAGCCCAGGCCCACGTAGTCAATAGGGCTAA  700

seq1  CACCCAAAACACTGGGGCTAAATACACACCA-TTGTTCTCTTCAGAAGCT  749
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CACCCAAAACACTGGGGCTAAATACACACCATTTGTTCTCTTCAGAAGCT  750

seq1  CTGTTCTCCCTAACTCAAGATGTTGGAAGAACACTTAGCTCAGTGGTCTG  799
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCT-CCTAACTCAAGATGTTGGAAGAACACTTAGCTCAGTGGTCTG  799

seq1  AAGACTTAGAGTCAAAAGACCAAAGCTCAGGCCCCACA-CTAACAACTTC  848
      ||||||||||||| |||||||||   |||||||||||| |||||||||||
seq2  AAGACTTAGAGTC-AAAGACCAAGCTTCAGGCCCCACACCTAACAACTTC  848

seq1  CTGTGACCTTTGTAAAATCACTT-AAGTATTTGCAGCTTCAGCTTGCTTA  897
         |||||||||||||||||||| |||||||||||| |||||||||||||
seq2  TGTTGACCTTTGTAAAATCACTTAAAGTATTTGCAG-TTCAGCTTGCTTA  897

seq1  TCTCTGAG-ATGT-GGTGGGAGATAATTAGCCTGGTTCTTTCACCTGGCT  945
      |||||||| |||| ||||||| |  |||||||||||||||||||||||||
seq2  TCTCTGAGAATGTGGGTGGGAAAATATTAGCCTGGTTCTTTCACCTGGCT  947

seq1  GCAGT-GAGCAGCAA  959
      ||||| |||||||||
seq2  GCAGTGGAGCAGCAA  962