BAC Information

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BAC

Clone NameB6Ng01-018I09
Chromosome3 (Build37)
Map Location 41,059,059 - 41,059,586
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018I09.bB6Ng01-018I09.g
ACCDH851903DH851904
length683530
definitionDH851903|Mus musculus domesticus DNA, BAC clone: B6Ng01-018I09, 5' end.DH851904|Mus musculus domesticus DNA, BAC clone: B6Ng01-018I09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatatattggatattagtc
ccctatccaatttgggataggtaaagatcctttcccaatctgttggtggc
ctttttgtcttattgatggtgtcttttgctttgcagaagctttgcaattt
tatgaggtcccatttatcgattcttgatcttacagcacaagccattgctg
ttctattcaggaattttccccctgtacccatatcttcgaggcttttccct
actttctcctctataagtttcagtgtctctggttttatgtggagttcctt
aatccacttagatttgaccttagtacaaggagatagaaatggatcaattc
gcattcttctacatgataaccgccagttgtgccagcaccatttgttgaaa
atgctgtctttttttcactggatggttttagctcccttgtcaaagatcaa
gtgaccataggtgtgtgggttcatctctgggtcgtcaattctgttccatt
ggtctacttgtctgtcactataccagtaccatgcagttttgatcacaatt
gctctgtagtacagttttaggtccggcatggtgattcccaccaaaggttt
tttatccttgagaagagtttttgctatcctcgg
tttgtttagctctatatccaattttttgatttggttgtttggggtttttt
tttgagattagcttcttgagttctttatattttttggatattattcctct
attggatgtgaggttagtgaagttttttttttttttccccaatctgtagg
ttgccgatttgtcttattgactatgtcttttgccttaacaaagcttttcc
attttatgagatcccatttatcaattattgatcttagagcctaaggagga
gggggaccccatagggagaccagcagtctcaactaacccggactcccagg
atctctcagacactgagccaccaaccagacagcattcactagctggttgg
agaaccctggcccatatacagcagaggactgcctggtctggcctcagtga
gagaacatgtgcctaacccttgagagacttgaggccccagggagtaggga
agcctggcagggtttggggtagaggtgggagcatcctcttggagacagag
ggaggaagagtgggatgagaaactgtggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059059_41059586
seq2: B6Ng01-018I09.b_193_720 (reverse)

seq1  CCTAGGATAGCAAAAACTCTTCTCAAGGATAACAGAACCTCTGGT-GGAA  49
      || ||||||||||||||||||||||||||||| | ||||| |||| ||||
seq2  CCGAGGATAGCAAAAACTCTTCTCAAGGATAA-AAAACCTTTGGTGGGAA  49

seq1  TCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACT  99
      |||||||||| |||||||| || |||||||||||||||||||| ||||||
seq2  TCACCATGCCGGACCTAAAACTGTACTACAGAGCAATTGTGATCAAAACT  99

seq1  GCATGGTACTGGTATAGTGACAGACAAGCAGACCAATGGAATAGAATTGA  149
      |||||||||||||||||||||||||||| |||||||||||| ||||||||
seq2  GCATGGTACTGGTATAGTGACAGACAAGTAGACCAATGGAACAGAATTGA  149

seq1  AGACTCAGAAACGAATCCACACACCTATGGTCACTTGATCTTCGACAAGG  199
       ||| |||| | ||| |||||||||||||||||||||||||| |||||||
seq2  CGACCCAGAGATGAACCCACACACCTATGGTCACTTGATCTTTGACAAGG  199

seq1  GAGCTAAAACCATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGC  249
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAGCTAAAACCATCCAGTGAAAAAAAGACAGCATTTTCAACAAATGGTGC  249

seq1  TGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATTGATCCACTCCT  299
      ||||||||||||  ||||||||||||||||||||||||||||||| | ||
seq2  TGGCACAACTGGCGGTTATCATGTAGAAGAATGCGAATTGATCCATTTCT  299

seq1  ATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACGCCACATAA  349
      ||||||||||||||||||||||||||||||||| ||||||| ||||||||
seq2  ATCTCCTTGTACTAAGGTCAAATCTAAGTGGATTAAGGAACTCCACATAA  349

seq1  AACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAA  399
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  AACCAGAGACACTGAAACTTATAGAGGAGAAAGTAGGGAAAAGCCTCGAA  399

seq1  GATATGGTCACAGGGGAAAAATTCCTGCATAGAACAGCAATGGCTTGTGC  449
      |||||||  ||||||| |||||||||| ||||||||||||||||||||||
seq2  GATATGGGTACAGGGGGAAAATTCCTGAATAGAACAGCAATGGCTTGTGC  449

seq1  TGTAAGATTGAGAATAGACAAATGGGACCTCATGAAACTGCAAAGCTTCT  499
      ||||||||  ||||| || |||||||||||||| ||| ||||||||||||
seq2  TGTAAGATCAAGAATCGATAAATGGGACCTCATAAAATTGCAAAGCTTCT  499

seq1  GCAAGGCAAAAGACACCGTCAATAAGACA  528
      |||| |||||||||||| |||||||||||
seq2  GCAAAGCAAAAGACACCATCAATAAGACA  528