BAC Information

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BAC

Clone NameB6Ng01-019M11
Chromosome3 (Build37)
Map Location 149,527,695 - 149,528,869
singlet/doubletsinglet
Overlap genenone
Upstream geneLphn2, LOC100040368, LOC668893, EG381483, LOC100040620
Downstream geneLOC100040633, LOC100040455, LOC100040463, LOC623554
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019M11.bB6Ng01-019M11.g
ACCDH852768DH852769
length1,149949
definitionDH852768|Mus musculus domesticus DNA, BAC clone: B6Ng01-019M11, 5' end.DH852769|Mus musculus domesticus DNA, BAC clone: B6Ng01-019M11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttgttaccctagtctccattcgctgttgtgaccttacatagc
tgggctactactccaaggccttcctagactttgagtggcatgttcatatg
tatttgtaatcccactggccctaccagatttaaaaccaaggcaaaatgga
aatgggtaagaattatcttgcagattatccattccctgaccacctcacct
atagaacaatttgggattgtaactgactaagcactgcacatatgctacta
tttcacaggtatgtgtaggttttagttgtacatttagaataaaataaaat
aaaataaaataaaataaaacaaaatagaataaaacctccgtagtattttg
cttgaagaactcaccatcactggaacagcaaacagtcctgatattttttt
gctctctcaagtttctggatgaagaaaacagataaaaaggcagaggagtt
actgtggttgccagactgtgggctgagttcagtatttcttggaggggttt
ctatgtcccagttcagacatcttgatctgtgtctcagtcaagctatttcc
ttacaataggaacctcttgaccatttctctttcccacatcctgtcaggag
aacgtcccgtgctggtagccatctattgaaagttttcccctttccagtca
tgacacatacaggttattgctctcttttaagaggaaatattttcacagtt
ttcccctcagaaaaagtctaaattctattaagcccacattaattaccctt
ttctatgtctctttaaaatgaatttgctttatctttcctaaactgatgct
tattgttttgttttagggtagaaaaacatggactgttacagatttttaat
ataattaggttgaaaatatccacagctctgaaattgattacaagaaaaaa
atgtctaccctttcatcttcatgttacaccagaaagaaatatcttcacac
tggaactcaatttgtgacaaattggaaagcaataaaatagaaaaataaca
gccagtagacatttcctcctttataaccatttcttcaaatgcgattgggg
aactgtttatttcaaagtagtttcagagggagaaaaagactccttttctt
ttcgtttccttttcttttcttcctttaatcttccagttgggtacactac

gaattctctgtttagttctataccttattttttgattgcgttgcctggga
ttcagaagttagcttcttgagttctttttatattttggatattagccctc
tatctgatgtgggattaatgaagatctttttctcaatgtgtaggtgctaa
tttgtgttactgactatgtcttttgccttacagaagctttccagtttcat
gaggtcccatttatcaattcttgatcttagagcatcagccattggggttc
agtttaagaaatttcctcctgtgctaacaagttcaaggctctgtcccact
ttctctactattagattcagtgtatctgattttatgttgcgatgatctat
ccacttggacttgagctttttgcaaggtgacaaaaaggatctattttcat
ttttctacatacagacatccagctagaccagcaccatttattgaagatgc
tatctttttgccattcaatatttttggcttctttgtcaatgaacaagtgt
gcataagtgtgtaggtttatttctggttcttcaattctattccattgatc
aacatgtctgtctctgtactaatacaatccagggtttgtgcttttgtttt
tgtctttttcttttttaaaatcactatttctctgtagtaaagtttgaggt
tggggatggtgattaccaccagcagttcttttattgttaagaattatttt
tcacttcttctggactttttgcctttctggatgaatttgagattttttct
ctttccatgtctttgaagaattatgttgggactttgatggggattgcctt
tgaatctgtagattgcctttggtatgatggccacgtttactgtgttaatt
ctttcaatccatgagcatgggagatcttccatttcctgagatcttctatg
atttctttgtgagaatttgaatccagggaacttttcatatttcaaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_149527695_149528869
seq2: B6Ng01-019M11.b_45_1193

seq1  GAATTCTTTTGTTACCCTAGTCTCCATTCGCTGTTGTGACCTTACATAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGTTACCCTAGTCTCCATTCGCTGTTGTGACCTTACATAGC  50

seq1  TGGGCTACTACTCCAAGGCCTTCCTAGACTTTGAGTGGCATGTTCATATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTACTACTCCAAGGCCTTCCTAGACTTTGAGTGGCATGTTCATATG  100

seq1  TATTTGTAATCCCACTGGCCCTACCAGATTTAAAACCAAGGCAAAATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTAATCCCACTGGCCCTACCAGATTTAAAACCAAGGCAAAATGGA  150

seq1  AATGGGTAAGAATTATCTTGCAGATTATCCATTCCCTGACCACCTCACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTAAGAATTATCTTGCAGATTATCCATTCCCTGACCACCTCACCT  200

seq1  ATAGAACAATTTGGGATTGTAACTGACTAAGCACTGCACATATGCTACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACAATTTGGGATTGTAACTGACTAAGCACTGCACATATGCTACTA  250

seq1  TTTCACAGGTATGTGTAGGTTTTAGTTGTACATTTAGAATAAAATAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAGGTATGTGTAGGTTTTAGTTGTACATTTAGAATAAAATAAAAT  300

seq1  AAAATAAAATAAAATAAAACAAAATAGAATAAAACCTCCGTAGTATTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAATAAAATAAAACAAAATAGAATAAAACCTCCGTAGTATTTTG  350

seq1  CTTGAAGAACTCACCATCACTGGAACAGCAAACAGTCCTGATATTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGAACTCACCATCACTGGAACAGCAAACAGTCCTGATATTTTTTT  400

seq1  GCTCTCTCAAGTTTCTGGATGAAGAAAACAGATAAAAAGGCAGAGGAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTCAAGTTTCTGGATGAAGAAAACAGATAAAAAGGCAGAGGAGTT  450

seq1  ACTGTGGTTGCCAGACTGTGGGCTGAGTTCAGTATTTCTTGGAGGGGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGTTGCCAGACTGTGGGCTGAGTTCAGTATTTCTTGGAGGGGTTT  500

seq1  CTATGTCCCAGTTCAGACATCTTGATCTGTGTCTCAGTCAAGCTATTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTCCCAGTTCAGACATCTTGATCTGTGTCTCAGTCAAGCTATTTCC  550

seq1  TTACAATAGGAACCTCTTGACCATTTCTCTTTCCCACATCCTGTCAGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATAGGAACCTCTTGACCATTTCTCTTTCCCACATCCTGTCAGGAG  600

seq1  AACGTCCCGTGCTGGTAGCCATCTATTGAAAGTTTTCCCCTTTCCAGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTCCCGTGCTGGTAGCCATCTATTGAAAGTTTTCCCCTTTCCAGTCA  650

seq1  TGACACATACAGGTTATTGCTCTCTTTTAAGAGGAAATATTTTCACAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACATACAGGTTATTGCTCTCTTTTAAGAGGAAATATTTTCACAGTT  700

seq1  TTCCCCTCAGAAAAAGTCTAAATTCTATTAAGCCCACATTAATTACCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTCAGAAAAAGTCTAAATTCTATTAAGCCCACATTAATTACCCTT  750

seq1  TTCTATGTCTCTTTAAAATGAATTTGCTTTATCTTTCCTAAACTGATGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGTCTCTTTAAAATGAATTTGCTTTATCTTTCCTAAACTGATGCT  800

seq1  TATTGTTTTGTTTTAGGGTAGAAAAACATGGACTGTTACAGATTTTTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTTTGTTTTAGGGTAGAAAAACATGGACTGTTACAGATTTTTAAT  850

seq1  ATAATTAGGTTGAAAAATATCCACAGCTCTTGAAATTGATTTACAAGAAA  900
      |||||||||||| |||||||||||||||| ||||||||| ||||||| ||
seq2  ATAATTAGGTTG-AAAATATCCACAGCTC-TGAAATTGA-TTACAAG-AA  896

seq1  AAAAATGTCTACCCTTTCCATCTTCATGTTACACCAGAAAGAAATATCTT  950
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAAAATGTCTACCCTTT-CATCTTCATGTTACACCAGAAAGAAATATCTT  945

seq1  CACACTGGAACTCAATTTGTGAACAAATTGGAAAAGCAAAATAAAATAGA  1000
      ||||||||||||||||||||| ||||||||| |||||  |||||||||||
seq2  CACACTGGAACTCAATTTGTG-ACAAATTGG-AAAGC--AATAAAATAGA  991

seq1  AAAATAACAGCCAGTAGACATTTCCCTCCTCTATACACATTTCTTCAAAA  1050
      ||||||||||||||||||||||| |||||| ||||  |||||||||  ||
seq2  AAAATAACAGCCAGTAGACATTT-CCTCCTTTATAACCATTTCTTC--AA  1038

seq1  ATGCCGATTGGGGAACTGTGTAATTTCAAAAGTTAGTTTCCAGAGGGAGA  1100
      ||| ||||||||||||||| | ||||||||   |||||| ||||||||||
seq2  ATG-CGATTGGGGAACTGT-TTATTTCAAA--GTAGTTT-CAGAGGGAGA  1083

seq1  AAAAGACTTCTTTTTCCTTTTCGTTTTCTTTTTCTTTTCTTTTCTCTTTT  1150
      |||||||| |||||  ||||||| |||| |||||||||||    || |||
seq2  AAAAGACTCCTTTT--CTTTTCG-TTTCCTTTTCTTTTCT----TCCTTT  1126

seq1  AAATCTTCCAGTTTGGTACAACTAC  1175
       |||||||||||| ||||| |||||
seq2  -AATCTTCCAGTTGGGTAC-ACTAC  1149


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