BAC Information

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BAC

Clone NameB6Ng01-021C24
Chromosome3 (Build37)
Map Location 75,695,037 - 75,696,192
singlet/doubletsinglet
Overlap geneGolph4
Upstream geneBC050789, Serpini2, Wdr49, Pdcd10, Serpini1
Downstream geneFstl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021C24.bB6Ng01-021C24.g
ACCDH853766DH853767
length8421,145
definitionDH853766|Mus musculus domesticus DNA, BAC clone: B6Ng01-021C24, 5' end.DH853767|Mus musculus domesticus DNA, BAC clone: B6Ng01-021C24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttcatgttttaagatgttttcattgtttcatccccctctttgg
ttgtgttttcatggacttcattaatagatttattaatatcttctttaagg
ttctggaacatattcataactatttgaaatcttttccttgggattcagct
gtattgaagttctaagcatctactatatcgtagagttactaaatactggt
agagccatactgtataggctggtaatgcttatgttttgtgctggcattta
ggcatctgggattgggaaaatggagacaattgatatatagtcttgtattt
attgggtgagtcttttgttttttgtatctttgtttctgttgttttctctt
aggaaaatataatggccgtgggttgcctggtagggagtacttctataggc
cagtgagtagcacagagagatagaagtgggttagtagaacaggttgagca
gagcttcaggtaagacgtaaggggatgccgttcacccctagacacagggt
ccccagggatatgaatgtgctttggaaagaggggattttgcatgtagtat
ttgatacgtcaaagaattgtctggagagacatggaagaaaggaccagggg
gtagccttggtctaaagccaaagttggagtatagttgaagcgggaggagg
gactcttgtaaaaaggtcgttattgggctgaacatgagaatggagagatc
ataaagaaggacaggaaaggcggtatgattcacctaactgggtccctgat
gggttccgatgctaaacatcctaggtagcaagtttctatgtgagggttaa
ggaaagaatgggggtgcgctggaagggttggggttggggctt

gaattctaagagctcacaagaattgtaaatccttcgaaaagtaagatata
agatggaaggttaagaacataaagacttatttagtttgcagacaataaag
aagtagggggcctgcgggcaagctccaagtgctctgagggacttattaaa
caagatgggagcaaatagctcttagtcgtatgaacaagtagaagaagtta
aagtgacccatgggggacataaatgcaacaattttctgactcctagggtt
ataaaacaccacaacaggctgctgatggagcgtgcctttgcttttctttg
gatactttctagaaaaatcaaacattcataagactcggtggtaccaagga
gagttaacttcagctctatctccacaggaagctgaattttacaaatttta
tcctagatgtttaccatttatataaagaagggtaaaagatctccaagcta
agtagaaaacatggaaatttcctaaagaataccaatcctaaggttggttg
tcagaaaaaaaaaaactgtaaggcacacaaagagcttcaacagaagggac
aatgatgtaggaaggactcaccaccttggccaggtttcagtagtggtata
tacttttgccagcactcagaccatgtgtggcaagagtgttagcatgagtc
agagctgtcctctgcacttaatcagggacacagtctgcctgttggagctg
tgaaatgtgctccttgctattgggtgatgtgaccaagtggtttgactgaa
gagtcatcatctaaggagtcttaccacctccctcttcttcggggattccc
tggtcctcgactccctgtgcgatgtcattctccacagcattgtaatgagc
ttgctgcctgtcagggcccaaattcgaaataaaaaaatcagttggcacag
tttgacaaagtcatttctctttcaagacaggataaataagattcaacttt
cagaatagccattactcgtttctgagatgtagacacatagtaaagtgtaa
atagtgaatagcagatgctcaagtcacctttaaatagtacattgtcattc
cgcaaagaataaagttagaactgaggatgttaagctatttggaatgcttt
gtttactttgcaaggatgtgccaatgtggttatgcctgtaagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_75695037_75696192
seq2: B6Ng01-021C24.g_64_1208

seq1  GAATTCTAAGAGCTCACAAGAATTGTAAATCCTTCGAAAAGTAAGATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGAGCTCACAAGAATTGTAAATCCTTCGAAAAGTAAGATATA  50

seq1  AGATGGAAGGTTAAGAACATAAAGACTTATTTAGTTTGCAGACAATAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAAGGTTAAGAACATAAAGACTTATTTAGTTTGCAGACAATAAAG  100

seq1  AAGTAGGGGGCCTGCGGGCAAGCTCCAAGTGCTCTGAGGGACTTATTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGGGGGCCTGCGGGCAAGCTCCAAGTGCTCTGAGGGACTTATTAAA  150

seq1  CAAGATGGGAGCAAATAGCTCTTAGTCGTATGAACAAGTAGAAGAAGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGGGAGCAAATAGCTCTTAGTCGTATGAACAAGTAGAAGAAGTTA  200

seq1  AAGTGACCCATGGGGGACATAAATGCAACAATTTTCTGACTCCTAGGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACCCATGGGGGACATAAATGCAACAATTTTCTGACTCCTAGGGTT  250

seq1  ATAAAACACCACAACAGGCTGCTGATGGAGCGTGCCTTTGCTTTTCTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACACCACAACAGGCTGCTGATGGAGCGTGCCTTTGCTTTTCTTTG  300

seq1  GATACTTTCTAGAAAAATCAAACATTCATAAGACTCGGTGGTACCAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTTTCTAGAAAAATCAAACATTCATAAGACTCGGTGGTACCAAGGA  350

seq1  GAGTTAACTTCAGCTCTATCTCCACAGGAAGCTGAATTTTACAAATTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAACTTCAGCTCTATCTCCACAGGAAGCTGAATTTTACAAATTTTA  400

seq1  TCCTAGATGTTTACCATTTATATAAAGAAGGGTAAAAGATCTCCAAGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGATGTTTACCATTTATATAAAGAAGGGTAAAAGATCTCCAAGCTA  450

seq1  AGTAGAAAACATGGAAATTTCCTAAAGAATACCAATCCTAAGGTTGGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAAACATGGAAATTTCCTAAAGAATACCAATCCTAAGGTTGGTTG  500

seq1  TCAGAAAAAAAAAAACTGTAAGGCACACAAAGAGCTTCAACAGAAGGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAAAAAAAAACTGTAAGGCACACAAAGAGCTTCAACAGAAGGGAC  550

seq1  AATGATGTAGGAAGGACTCACCACCTTGGCCAGGTTTCAGTAGTGGTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGTAGGAAGGACTCACCACCTTGGCCAGGTTTCAGTAGTGGTATA  600

seq1  TACTTTTGCCAGCACTCAGACCATGTGTGGCAAGAGTGTTAGCATGAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTGCCAGCACTCAGACCATGTGTGGCAAGAGTGTTAGCATGAGTC  650

seq1  AGAGCTGTCCTCTGCACTTAATCAGGGACACAGTCTGCCTGTTGGAGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGTCCTCTGCACTTAATCAGGGACACAGTCTGCCTGTTGGAGCTG  700

seq1  TGAAATGTGCTCCTTGCTATTGGGTGATGTGACCAAGTGGTTTGACTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGTGCTCCTTGCTATTGGGTGATGTGACCAAGTGGTTTGACTGAA  750

seq1  GAGTCATCATCTAAGGAGTCTTACCACCTCCCTCTTCTTCGGGGATTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATCATCTAAGGAGTCTTACCACCTCCCTCTTCTTCGGGGATTCCC  800

seq1  TGGTCCTCGACTCCCTGTGCGATGTCATTCTCCACAGCATTGTAATGAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTCGACTCCCTGTGCGATGTCATTCTCCACAGCATTGTAATGAGC  850

seq1  TTGCTGCCTGTCAGGGGCCCAAATTCGGAGATAAAAAAAATCAGTTGGCA  900
      ||||||||||||| |||||||||||| || || |||||||||||||||||
seq2  TTGCTGCCTGTCA-GGGCCCAAATTC-GAAAT-AAAAAAATCAGTTGGCA  897

seq1  CAGTTTGACCAAGGTCATTTCTCTTTCAAGACAGGGATAAATAAAGATTT  950
      |||||||| ||| |||||||||||||||||||| |||||||| |||| ||
seq2  CAGTTTGA-CAAAGTCATTTCTCTTTCAAGACA-GGATAAAT-AAGA-TT  943

seq1  CAACTTTCAGAATAAGCCATAACTCGTTTCTGAGATGTAGACACATAGTA  1000
      ||||||||||||| |||||| |||||||||||||||||||||||||||||
seq2  CAACTTTCAGAAT-AGCCATTACTCGTTTCTGAGATGTAGACACATAGTA  992

seq1  AAGTGT-AATAGTG-ATAGCAGATGCTTCCAAAGTCCACCTTTAAATAGT  1048
      |||||| ||||||| ||||||||||||    |||| ||||||||||||||
seq2  AAGTGTAAATAGTGAATAGCAGATGCT---CAAGT-CACCTTTAAATAGT  1038

seq1  ACATTGTCATTCCCGCATAGAATAAAGTTAGAGCTGAGGATGTTAGGCTA  1098
      ||||||||||| ||||| |||||||||||||| |||||||||||| ||||
seq2  ACATTGTCATT-CCGCAAAGAATAAAGTTAGAACTGAGGATGTTAAGCTA  1087

seq1  TTTTGGGAATGCTTGTTTTTACTTTGCAGGAGTGTG-CAATGTG--TATG  1145
      |||  ||||||||| | ||||||||||| |  |||| |||||||  ||||
seq2  TTT--GGAATGCTT-TGTTTACTTTGCAAGGATGTGCCAATGTGGTTATG  1134

seq1  CCTGTAAGTTT  1156
      |||||||||||
seq2  CCTGTAAGTTT  1145


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