BAC Information

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BAC

Clone NameB6Ng01-025A13
Chromosome3 (Build37)
Map Location 20,623,651 - 20,624,728
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665002, LOC100039304, LOC100040237, 4632415L05Rik, Cp, Hps3, Hltf, Gyg, Cpa3, EG664965, LOC100040283, Cpb1, Agtr1b
Downstream geneEG665094, LOC100040325
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025A13.bB6Ng01-025A13.g
ACCDH856496DH856497
length8131,074
definitionDH856496|Mus musculus domesticus DNA, BAC clone: B6Ng01-025A13, 5' end.DH856497|Mus musculus domesticus DNA, BAC clone: B6Ng01-025A13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtttagctctgttttgccacacactccggttgagtcagcttga
caggctgagaagcctgtgaaacgctcacgaggcaaagaatttcacggaag
ctcacctcctggagttctggcgttctcattaacccatatactcataccct
attcccaagttagtctggtatatggatccacgtgctcttttagtattatc
ttattataagtgcattttaagattgaattctgacatagcttagcctttac
cagtgttccaaagtcctagatagtccttgagccaaccctgggcttggaat
tcagtaagaatgttgcctgttcagtgacatacagaattgcctctggtaat
acactatcacttagaataaaaggcaagtccctcccatatacaggaattta
caatggtttagaaagtagatcaggctgtggttttagagtattgcattatt
catgagatggttagctagaacggaactccctaattataaccatgatttgg
gtgtgaaagcccttgccctaggagtgtaaagacctcacacctggcttcta
agactatagttgaccttagatagggctgatatttttattgcccagttcct
gccagtctttgtgtttacattcctctgctttgtgtaagagtcattaagca
tctggtaacctcatttgtaccttgccgatgttgtcacctaacttccctat
tttcttctgtataaaaagttgatgctcaatttgagaaattacattcaaat
tctacacaacctctcctgtgtgcatctgtctgtcatttcatccaatgttt
ttcccacctgcaa
gaattctttgtactatttttgcctgcctgagactttttcataatacaaaa
aaaaaaaagtaaaagtaaaaaacaaaacaaaacaaacaaacaaacaaaca
aaaaaacaacaacaaaaacaaaaactgcatggtaatggtatagagacagg
caggtagaccaatggaatagaattgaagaaccagaagtgaactcacacac
ctatggttacttggtctttgacaaaccatccagtgaatgaagatggtcct
tgaaaagcccccccccctttttggttaagagaatgagcttcttgcttaca
attagactctgaatgagagtcagaggtcaactctaatcatatgccatttc
catttatgtaatccaagaaccccagtttcaaagctatccaaagacatttc
ctgatttactcaaaactgatttactgaaactctgtccagggagagatttt
atggtttttacagttctctcaaaaaacaaggcaagtttattatctctttt
gtcctaagaagtagcaactgtctaacatattcatcttttaatttttccta
atatctctctgctgtatgagtgaaataatgaacaagtagatggcatctta
cagttctttgtgatgttcttctgtaaaacatgaatttaaacaaaatgcat
atcacctgcttgcaggggtggaaatttacagagctgtgaaacagaccttg
gttaacatcacgtatcctgacctacagcacagcttctgcagtttgagaga
aggggaatcaacagtatttccagtcacaataagttcttcaatgttgttgc
ttcctgacaatacattaaactctgtataggaagtgaaaataatagtgtta
tttataaattaggcatttttaggaaaggagtgccagtctgaattatatat
ctgttttgtggcaatttggtgagtatggctctgcacacaactggaagaga
tgttctcactcattaattgaagaagtatatagagacaacagaatcagaaa
aatggcttagtggtcatcagtggaaagagagcccattagtcgtgcaaact
ttatatgcctcagtacagggaacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_20623651_20624728
seq2: B6Ng01-025A13.g_69_1142 (reverse)

seq1  CGTTCCCCTGTACTGAGGCATATAAAGTTTGCACGACTAATGGGCCTCTC  50
      |||| ||||||||||||||||||||||||||||||||||||||| |||||
seq2  CGTT-CCCTGTACTGAGGCATATAAAGTTTGCACGACTAATGGG-CTCTC  48

seq1  TTTCCACTGATGGCCAACTAAGCCA-TTTTCTGATTCTGTTGTCTCTTAT  99
      |||||||||||| || ||||||||| |||||||||||||||||||| |||
seq2  TTTCCACTGATGACC-ACTAAGCCATTTTTCTGATTCTGTTGTCTC-TAT  96

seq1  ATACTTCTTCAATTAATGAGTGAGAACATCTCCTTCCAGTTGTGTGCAGA  149
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATACTTCTTCAATTAATGAGTGAGAACATCT-CTTCCAGTTGTGTGCAGA  145

seq1  GCCATACTCACCAAATTGCCACAAAACAGATATATAATTCAGACTGGCAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATACTCACCAAATTGCCACAAAACAGATATATAATTCAGACTGGCAC  195

seq1  TCCTTTCCTAAAAATGCCTAATTTATAAATAACACTATTATTTTCACTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCCTAAAAATGCCTAATTTATAAATAACACTATTATTTTCACTTC  245

seq1  CTATACAGAGTTTAATGTATTGTCAGGAAGCAACAACATTGAAGAACTTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAGAGTTTAATGTATTGTCAGGAAGCAACAACATTGAAGAACTTA  295

seq1  TTGTGACTGGAAATACTGTTGATTCCCCTTCTCTCAAACTGCAGAAGCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACTGGAAATACTGTTGATTCCCCTTCTCTCAAACTGCAGAAGCTG  345

seq1  TGCTGTAGGTCAGGATACGTGATGTTAACCAAGGTCTGTTTCACAGCTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTAGGTCAGGATACGTGATGTTAACCAAGGTCTGTTTCACAGCTCT  395

seq1  GTAAATTTCCACCCCTGCAAGCAGGTGATATGCATTTTGTTTAAATTCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTTCCACCCCTGCAAGCAGGTGATATGCATTTTGTTTAAATTCAT  445

seq1  GTTTTACAGAAGAACATCACAAAGAACTGTAAGATGCCATCTACTTGTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACAGAAGAACATCACAAAGAACTGTAAGATGCCATCTACTTGTTC  495

seq1  ATTATTTCACTCATACAGCAGAGAGATATTAGGAAAAATTAAAAGATGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTCACTCATACAGCAGAGAGATATTAGGAAAAATTAAAAGATGAA  545

seq1  TATGTTAGACAGTTGCTACTTCTTAGGACAAAAGAGATAATAAACTTGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAGACAGTTGCTACTTCTTAGGACAAAAGAGATAATAAACTTGCC  595

seq1  TTGTTTTTTGAGAGAACTGTAAAAACCATAAAATCTCTCCCTGGACAGAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTTGAGAGAACTGTAAAAACCATAAAATCTCTCCCTGGACAGAG  645

seq1  TTTCAGTAAATCAGTTTTGAGTAAATCAGGAAATGTCTTTGGATAGCTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTAAATCAGTTTTGAGTAAATCAGGAAATGTCTTTGGATAGCTTT  695

seq1  GAAACTGGGGTTCTTGGATTACATAAATGGAAATGGCATATGATTAGAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGGGGTTCTTGGATTACATAAATGGAAATGGCATATGATTAGAGT  745

seq1  TGACCTCTGACTCTCATTCAGAGTCTAATTGTAAGCAAGAAGCTCATTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCTGACTCTCATTCAGAGTCTAATTGTAAGCAAGAAGCTCATTCT  795

seq1  CTTAACCAAAAAGGGGGGGGGGCTTTTCAAGGACCATCTTCATTCACTGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACCAAAAAGGGGGGGGGGCTTTTCAAGGACCATCTTCATTCACTGG  845

seq1  ATGGTTTGTCAAAGACCAAGTAACCATAGGTGTGTGAGTTCACTTCTGGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTGTCAAAGACCAAGTAACCATAGGTGTGTGAGTTCACTTCTGGT  895

seq1  TCTTCAATTCTATTCCATTGGTCTACCTGCCTGTCTCTATACCATTACCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAATTCTATTCCATTGGTCTACCTGCCTGTCTCTATACCATTACCA  945

seq1  TGCAGTTTTTGTTTTTGTTGTTGTTTTTTTGTTTGTTTGTTTGTTTGTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTTTTGTTTTTGTTGTTGTTTTTTTGTTTGTTTGTTTGTTTGTTT  995

seq1  TGTTTTGTTTTTTACTTTTACTTTTTTTTTTTTGTATTATGAAAAAGTCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTTTTACTTTTACTTTTTTTTTTTTGTATTATGAAAAAGTCT  1045

seq1  CAGGCAGGCAAAAATAGTACAAAGAATTC  1078
      |||||||||||||||||||||||||||||
seq2  CAGGCAGGCAAAAATAGTACAAAGAATTC  1074